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Alexandre Fort
Alexandre Fort
University of Geneva Medical School
Verified email at unige.ch
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An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ...
Nature biotechnology 35 (9), 872-878, 2017
5472017
Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance
A Fort, K Hashimoto, D Yamada, M Salimullah, CA Keya, A Saxena, ...
Nature genetics 46 (6), 558-566, 2014
3112014
A complete tool set for molecular QTL discovery and analysis
O Delaneau, H Ongen, AA Brown, A Fort, NI Panousis, ET Dermitzakis
Nature communications 8 (1), 15452, 2017
2722017
Functional annotation of human long noncoding RNAs via molecular phenotyping
JA Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ...
Genome research 30 (7), 1060-1072, 2020
1342020
Biased allelic expression in human primary fibroblast single cells
C Borel, PG Ferreira, F Santoni, O Delaneau, A Fort, KY Popadin, ...
The American Journal of Human Genetics 96 (1), 70-80, 2015
1332015
Regulation of fibrinogen production by microRNAs
A Fort, C Borel, E Migliavacca, SE Antonarakis, RJ Fish, ...
Blood, The Journal of the American Society of Hematology 116 (14), 2608-2615, 2010
1162010
Loss of Dicer in Sertoli cells has a major impact on the testicular proteome of mice
MD Papaioannou, M Lagarrigue, CE Vejnar, AD Rolland, F Kühne, ...
Molecular & Cellular Proteomics 10 (4), 2011
1082011
CAGE profiling of ncRNAs in hepatocellular carcinoma reveals widespread activation of retroviral LTR promoters in virus-induced tumors
K Hashimoto, AM Suzuki, A Dos Santos, C Desterke, A Collino, S Ghisletti, ...
Genome research 25 (12), 1812-1824, 2015
562015
The effect of genetic variation on promoter usage and enhancer activity
M Garieri, O Delaneau, F Santoni, RJ Fish, D Mull, P Carninci, ...
Nature communications 8 (1), 1358, 2017
552017
MBV: a method to solve sample mislabeling and detect technical bias in large combined genotype and sequencing assay datasets
A Fort, NI Panousis, M Garieri, SE Antonarakis, T Lappalainen, ...
Bioinformatics 33 (12), 1895-1897, 2017
412017
Nuclear AGO1 regulates gene expression by affecting chromatin architecture in human cells
M Shuaib, KM Parsi, M Thimma, SA Adroub, H Kawaji, L Seridi, ...
Cell systems 9 (5), 446-458. e6, 2019
292019
A liver enhancer in the fibrinogen gene cluster
A Fort, RJ Fish, C Attanasio, R Dosch, A Visel, M Neerman-Arbez
Blood, The Journal of the American Society of Hematology 117 (1), 276-282, 2011
252011
Developmental expression and organisation of fibrinogen genes in the zebrafish
RJ Fish, S Vorjohann, F Béna, A Fort, M Neerman-Arbez
Thrombosis and haemostasis 107 (01), 158-166, 2012
232012
Nuclear transcriptome profiling of induced pluripotent stem cells and embryonic stem cells identify non-coding loci resistant to reprogramming
A Fort, D Yamada, K Hashimoto, H Koseki, P Carninci
Cell Cycle 14 (8), 1148-1155, 2015
142015
HSA21 single-minded 2 (Sim2) binding sites co-localize with super-enhancers and pioneer transcription factors in pluripotent mouse ES cells
A Letourneau, G Cobellis, A Fort, F Santoni, M Garieri, E Falconnet, ...
PLoS One 10 (5), e0126475, 2015
132015
Consortium F, Hasegawa Y, Forrest AR, Carninci P. 2014. Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency …
A Fort, K Hashimoto, D Yamada, M Salimullah, CA Keya, A Saxena, ...
Nat Genet 46 (6), 558-566, 0
13
A novel frameshift mutation in FGA (c. 1846 del A) leading to congenital afibrinogenemia in a consanguineous Syrian family
E Levrat, I Aboukhamis, P de Moerloose, J Farho, S Chamaa, G Reber, ...
Blood coagulation & fibrinolysis 22 (2), 148-150, 2011
112011
In vitro rescue of FGA deletion by lentiviral transduction of an afibrinogenemic patient's hepatocytes
D Stroka, A Keogh, D Vu, A Fort, MH Stoffel, K Kühni‐Boghenbor, C Furer, ...
Journal of Thrombosis and Haemostasis 12 (11), 1874-1879, 2014
72014
Deep cap analysis of gene expression (CAGE): genome-wide identification of promoters, quantification of their activity, and transcriptional network inference
A Fort, RJ Fish
Promoter Associated RNA: Methods and Protocols, 111-126, 2017
52017
AGO1 in association with NEAT1 lncRNA contributes to nuclear and 3D chromatin architecture in human cells
M Shuaib, KM Parsi, H Kawaji, M Thimma, SA Adroub, A Fort, Y Ghosheh, ...
bioRxiv, 525527, 2019
32019
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