| Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle? WG Touw, JR Bayjanov, L Overmars, L Backus, J Boekhorst, M Wels, ... Briefings in bioinformatics 14 (3), 315-326, 2013 | 453 | 2013 |
| The proteolytic system of lactic acid bacteria revisited: a genomic comparison M Liu, JR Bayjanov, B Renckens, A Nauta, RJ Siezen BMC genomics 11, 1-15, 2010 | 401 | 2010 |
| Nomadic lifestyle of Lactobacillus plantarum revealed by comparative genomics of 54 strains isolated from different habitats ME Martino, JR Bayjanov, BE Caffrey, M Wels, P Joncour, S Hughes, ... Environmental microbiology 18 (12), 4974-4989, 2016 | 206 | 2016 |
| Complete Genome Sequence of Lactococcus lactis subsp. lactis KF147, a Plant-Associated Lactic Acid Bacterium RJ Siezen, J Bayjanov, B Renckens, M Wels, SAFT van Hijum, ... Journal of bacteriology 192 (10), 2649-2650, 2010 | 140 | 2010 |
| Comparative gut microbiota and resistome profiling of intensive care patients receiving selective digestive tract decontamination and healthy subjects E Buelow, T Bello González, S Fuentes, WAA de Steenhuijsen Piters, ... Microbiome 5, 1-10, 2017 | 109 | 2017 |
| Limited influence of hospital wastewater on the microbiome and resistome of wastewater in a community sewerage system E Buelow, JR Bayjanov, E Majoor, RJL Willems, MJM Bonten, H Schmitt, ... FEMS microbiology ecology 94 (7), fiy087, 2018 | 107 | 2018 |
| Genome‐scale diversity and niche adaptation analysis of Lactococcus lactis by comparative genome hybridization using multi‐strain arrays RJ Siezen, JR Bayjanov, GE Felis, MR van der Sijde, M Starrenburg, ... Microbial biotechnology 4 (3), 383-402, 2011 | 102 | 2011 |
| Explaining microbial phenotypes on a genomic scale: GWAS for microbes BE Dutilh, L Backus, RA Edwards, M Wels, JR Bayjanov, SAFT Van Hijum Briefings in functional genomics 12 (4), 366-380, 2013 | 79 | 2013 |
| Antibiotic-driven dysbiosis mediates intraluminal agglutination and alternative segregation of Enterococcus faecium from the intestinal epithelium APA Hendrickx, J Top, JR Bayjanov, H Kemperman, MRC Rogers, ... MBio 6 (6), 10.1128/mbio. 01346-15, 2015 | 65 | 2015 |
| PhenoLink - a web-tool for linking phenotype to ~omics data for bacteria: application to gene-trait matching for Lactobacillus plantarum strains JR Bayjanov, D Molenaar, V Tzeneva, RJ Siezen, SAFT van Hijum BMC genomics 13, 1-12, 2012 | 63 | 2012 |
| Diversity in robustness of Lactococcus lactis strains during heat stress, oxidative stress, and spray drying stress AR Dijkstra, MC Setyawati, JR Bayjanov, W Alkema, SAFT van Hijum, ... Applied and Environmental Microbiology 80 (2), 603-611, 2014 | 57 | 2014 |
| Volatile compound fingerprinting of mixed-culture fermentations FAM de Bok, PWM Janssen, JR Bayjanov, S Sieuwerts, A Lommen, ... Applied and Environmental Microbiology 77 (17), 6233-6239, 2011 | 56 | 2011 |
| RNA-seq and Tn-seq reveal fitness determinants of vancomycin-resistant Enterococcus faecium during growth in human serum X Zhang, V de Maat, AM Guzmán Prieto, TK Prajsnar, JR Bayjanov, ... BMC genomics 18, 1-12, 2017 | 49 | 2017 |
| The two-component system ChtRS contributes to chlorhexidine tolerance in Enterococcus faecium AM Guzmán Prieto, J Wijngaarden, JC Braat, MRC Rogers, E Majoor, ... Antimicrobial Agents and Chemotherapy 61 (5), 10.1128/aac. 02122-16, 2017 | 46 | 2017 |
| Distinct SagA from hospital-associated clade A1 Enterococcus faecium strains contributes to biofilm formation FL Paganelli, M de Been, JC Braat, T Hoogenboezem, C Vink, J Bayjanov, ... Applied and Environmental Microbiology 81 (19), 6873-6882, 2015 | 38 | 2015 |
| Genotype-phenotype matching analysis of 38 Lactococcus lactisstrains using random forest methods JR Bayjanov, MJC Starrenburg, MR van der Sijde, RJ Siezen, ... BMC microbiology 13, 1-11, 2013 | 38 | 2013 |
| PanCGH: a genotype-calling algorithm for pangenome CGH data JR Bayjanov, M Wels, M Starrenburg, JET van Hylckama Vlieg, RJ Siezen, ... Bioinformatics 25 (3), 309-314, 2009 | 36 | 2009 |
| Susceptibility of Pseudomonas aeruginosa recovered from cystic fibrosis patients to murepavadin and 13 comparator antibiotics MB Ekkelenkamp, R Cantón, M Díez-Aguilar, MM Tunney, DF Gilpin, ... Antimicrobial agents and chemotherapy 64 (2), 10.1128/aac. 01541-19, 2020 | 29 | 2020 |
| Enterococcus faecium genome dynamics during long-term asymptomatic patient gut colonization JR Bayjanov, J Baan, MRC Rogers, A Troelstra, RJL Willems, ... Microbial genomics 5 (7), e000277, 2019 | 29 | 2019 |
| Increased risk of acquisition and transmission of ESBL-producing Enterobacteriaceae in malnourished children exposed to amoxicillin N Maataoui, C Langendorf, F Berthe, JR Bayjanov, W van Schaik, ... Journal of Antimicrobial Chemotherapy 75 (3), 709-717, 2020 | 25 | 2020 |
