Fabian A. Buske

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Timothy BaileyUniversity of Nevada, RenoVerified email at unr.edu
Mikael BodenThe University of QueenslandVerified email at uq.edu.au
Denis C. BauerCSIRO eHealth - Biomedical Informatics Group - Transformational Bioinformatics TeamVerified email at csiro.au
William Stafford NobleProfessor of Genome Sciences, University of WashingtonVerified email at uw.edu
Wilfred W. LiUniversity of California, San DiegoVerified email at ucsd.edu
Luca ClementiUniversity of California San Diego, San Diego Supercomputer CenterVerified email at sdsc.edu
Seán O'DonoghueGarvan Institute of Medical Research, AustraliaVerified email at odonoghuelab.org
Clare StirzakerGarvan Institute of Medical ResearchVerified email at garvan.org.au
L. G. CarrascosaAustralian Institute for Bioengineering & Nanotechnology (AIBN) The University of QueenslandVerified email at uq.edu.au
Valerie Bríd O'Leary Ph.D.Charles University, Third Faculty of Medicine, Department of Medical GeneticsVerified email at lf3.cuni.cz
Phillippa TaberlayUniversity of TasmaniaVerified email at utas.edu.au
Julian HeinrichBayerVerified email at bayer.com
Andrea SchafferhansLecturer at Hochschule Weihenstephan Triesdorf and Postdoc in Bioinformatics at TUMVerified email at rostlab.org
Christian StolteCellarity, Inc.Verified email at cellarity.com
Burkhard RostProfessor of Computer ScienceVerified email at tum.de
Tom WhitingtonSchibstedVerified email at schibsted.com
Gabriel Cuellar PartidaGilead SciencesVerified email at gilead.com
Marcel E. DingerUniversity of SydneyVerified email at marceldinger.net
Michael FenechGenome Health FoundationVerified email at csiro.au
Martin A. SmithRamaciotti Centre for Genomics & UNSW SydneyVerified email at unsw.edu.au

Fabian A. Buske

Garvan Institute of Medical Research

Verified email at garvan.org.au - Homepage

data science machine learning bioinformatics


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MEME Suite: tools for motif discovery and searching TL Bailey, M Boden, FA Buske, M Frith, CE Grant, L Clementi, J Ren, ... Nucleic acids research 37 (suppl_2), W202-W208, 2009	9901	2009
Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations PC Taberlay, J Achinger-Kawecka, ATL Lun, FA Buske, K Sabir, ... Genome research 26 (6), 719-731, 2016	360	2016
Triplexator: detecting nucleic acid triple helices in genomic and transcriptomic data FA Buske, DC Bauer, JS Mattick, TL Bailey Genome research 22 (7), 1372-1381, 2012	226	2012
Potential in vivo roles of nucleic acid triple-helices FA Buske, JS Mattick, TL Bailey RNA biology 8 (3), 427-439, 2011	225	2011
PARTICLE, a triplex-forming long ncRNA, regulates locus-specific methylation in response to low-dose irradiation VB O’Leary, SV Ovsepian, LG Carrascosa, FA Buske, V Radulovic, ... Cell reports 11 (3), 474-485, 2015	224	2015
Assigning roles to DNA regulatory motifs using comparative genomics FA Buske, M Bodén, DC Bauer, TL Bailey Bioinformatics 26 (7), 860-866, 2010	221	2010
Epigenetic priors for identifying active transcription factor binding sites G Cuellar-Partida, FA Buske, RC McLeay, T Whitington, WS Noble, ... Bioinformatics 28 (1), 56-62, 2012	152	2012
WT1 controls antagonistic FGF and BMP-pSMAD pathways in early renal progenitors FJ Motamedi, DA Badro, M Clarkson, M Rita Lecca, ST Bradford, ... Nature communications 5 (1), 4444, 2014	125	2014
Acetylated histone variant H2A. Z is involved in the activation of neo-enhancers in prostate cancer F Valdés-Mora, CM Gould, Y Colino-Sanguino, W Qu, JZ Song, KM Taylor, ... Nature Communications 8 (1), 1346, 2017	88	2017
Aquaria: simplifying discovery and insight from protein structures SI O'donoghue, KS Sabir, M Kalemanov, C Stolte, B Wellmann, V Ho, ... Nature methods 12 (2), 98-99, 2015	73	2015
Alternatively spliced isoforms of WT1 control podocyte-specific gene expression J Lefebvre, M Clarkson, F Massa, ST Bradford, A Charlet, F Buske, ... Kidney international 88 (2), 321-331, 2015	56	2015
Triplex-Inspector: an analysis tool for triplex-mediated targeting of genomic loci FA Buske, DC Bauer, JS Mattick, TL Bailey Bioinformatics 29 (15), 1895-1897, 2013	38	2013
VariantSpark: population scale clustering of genotype information AR O’Brien, NFW Saunders, Y Guo, FA Buske, RJ Scott, DC Bauer BMC genomics 16, 1-9, 2015	36	2015
Genomics and personalised whole-of-life healthcare DC Bauer, C Gaff, ME Dinger, M Caramins, FA Buske, M Fenech, ... Trends in molecular medicine 20 (9), 479-486, 2014	32	2014
PARTICLE triplexes cluster in the tumor suppressor WWOX and may extend throughout the human genome VB O’Leary, J Smida, FA Buske, LG Carrascosa, O Azimzadeh, D Maugg, ... Scientific reports 7 (1), 7163, 2017	28	2017
NGSANE: a lightweight production informatics framework for high-throughput data analysis FA Buske, HJ French, MA Smith, SJ Clark, DC Bauer Bioinformatics 30 (10), 1471-1472, 2014	28	2014
Dual-functioning transcription factors in the developmental gene network of Drosophila melanogaster DC Bauer, FA Buske, TL Bailey BMC bioinformatics 11, 1-14, 2010	27	2010
Sorting the nuclear proteome DC Bauer, K Willadsen, FA Buske, KA Lê Cao, TL Bailey, G Dellaire, ... Bioinformatics 27 (13), i7-i14, 2011	25	2011
In silico characterization of protein chimeras: relating sequence and function within the same fold FA Buske, R Their, EMJ Gillam, M Bodén Proteins: Structure, Function, and Bioinformatics 77 (1), 111-120, 2009	16	2009
Predicting SUMOylation sites in developmental transcription factors of Drosophila melanogaster DC Bauer, FA Buske, TL Bailey, M Bodén Neurocomputing 73 (13-15), 2300-2307, 2010	5	2010

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