Ira Cooke
Cited by
Cited by
Tunable generic model for fluid bilayer membranes
IR Cooke, K Kremer, M Deserno
Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 72 (1 …, 2005
Solvent-free model for self-assembling fluid bilayer membranes: Stabilization of the fluid phase based on broad attractive tail potentials
IR Cooke, M Deserno
The Journal of chemical physics 123 (22), 2005
Coupling between lipid shape and membrane curvature
IR Cooke, M Deserno
Biophysical journal 91 (2), 487-495, 2006
Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis
H Liu, TG Stephens, RA González-Pech, VH Beltran, B Lapeyre, ...
Communications biology 1 (1), 95, 2018
Multi-omic data analysis using Galaxy
J Boekel, JM Chilton, IR Cooke, PL Horvatovich, PD Jagtap, L Käll, ...
Nature biotechnology 33 (2), 137-139, 2015
Integrating socio‐economics and ecology: a taxonomy of quantitative methods and a review of their use in agro‐ecology
IR Cooke, SA Queenborough, EHA Mattison, AP Bailey, DL Sandars, ...
Journal of Applied Ecology 46 (2), 269-277, 2009
Comparative genomics reveals the distinct evolutionary trajectories of the robust and complex coral lineages
H Ying, I Cooke, S Sprungala, W Wang, DC Hayward, Y Tang, G Huttley, ...
Genome biology 19, 1-24, 2018
The Whole-Genome Sequence of the Coral Acropora millepora
H Ying, DC Hayward, I Cooke, W Wang, A Moya, KR Siemering, ...
Genome biology and evolution 11 (5), 1374-1379, 2019
Genomic signatures in the coral holobiont reveal host adaptations driven by Holocene climate change and reef specific symbionts
I Cooke, H Ying, S Forêt, P Bongaerts, JM Strugnell, O Simakov, J Zhang, ...
Science advances 6 (48), eabc6318, 2020
The Southern Ocean: source and sink?
JM Strugnell, Y Cherel, IR Cooke, IG Gleadall, FG Hochberg, CM Ibáñez, ...
Deep Sea Research Part II: Topical Studies in Oceanography 58 (1-2), 196-204, 2011
Morphological stasis masks ecologically divergent coral species on tropical reefs
P Bongaerts, IR Cooke, H Ying, D Wels, S den Haan, ...
Current Biology 31 (11), 2286-2298. e8, 2021
What can the mitochondrial genome reveal about higher-level phylogeny of the molluscan class Cephalopoda?
AL Allcock, IR Cooke, JM Strugnell
Zoological Journal of the Linnean Society 161 (3), 573-586, 2011
De Novo Characterisation of the Greenlip Abalone Transcriptome (Haliotis laevigata) with a Focus on the Heat Shock Protein 70 (HSP70) Family
BP Shiel, NE Hall, IR Cooke, NA Robinson, JM Strugnell
Marine biotechnology 17, 23-32, 2015
Landscape, cropping and field boundary influences on bird abundance
GM Siriwardena, IR Cooke, WJ Sutherland
Ecography 35 (2), 162-173, 2012
Liver proteome response of pre-harvest Atlantic salmon following exposure to elevated temperature
WG Nuez-Ortín, CG Carter, PD Nichols, IR Cooke, R Wilson
BMC genomics 19, 1-13, 2018
Stretching polymers in poor and bad solvents: Pullout peaks and an unraveling transition
IR Cooke, DRM Williams
Europhysics Letters 64 (2), 267, 2003
Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data
K Sidorczuk, P Gagat, F Pietluch, J Kała, D Rafacz, L Bąkała, J Słowik, ...
Briefings in Bioinformatics 23 (5), bbac343, 2022
ampir: an R package for fast genome-wide prediction of antimicrobial peptides
LCHW Fingerhut, DJ Miller, JM Strugnell, NL Daly, IR Cooke
Bioinformatics 36 (21), 5262-5263, 2020
A pathway proteomic profile of ischemic stroke survivors reveals innate immune dysfunction in association with mild symptoms of depression–a pilot study
VA Nguyen, LM Carey, L Giummarra, P Faou, I Cooke, DW Howells, T Tse, ...
Frontiers in neurology 7, 85, 2016
Spatially varying selection between habitats drives physiological shifts and local adaptation in a broadcast spawning coral on a remote atoll in Western Australia
L Thomas, JN Underwood, NH Rose, ZL Fuller, ZT Richards, L Dugal, ...
Science Advances 8 (17), eabl9185, 2022
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