| Towards kinetic modeling of genome‐scale metabolic networks without sacrificing stoichiometric, thermodynamic and physiological constraints A Chakrabarti, L Miskovic, KC Soh, V Hatzimanikatis Biotechnology journal 8 (9), 1043-1057, 2013 | 173 | 2013 |
| Manipulating redox and ATP balancing for improved production of succinate in E. coli A Singh, KC Soh, V Hatzimanikatis, RT Gill Metabolic engineering 13 (1), 76-81, 2011 | 139 | 2011 |
| Network thermodynamics in the post-genomic era KC Soh, V Hatzimanikatis Current opinion in microbiology 13 (3), 350-357, 2010 | 99 | 2010 |
| Identification of metabolic engineering targets for the enhancement of 1,4-butanediol production in recombinant E. coli using large-scale kinetic models S Andreozzi, A Chakrabarti, KC Soh, A Burgard, TH Yang, S Van Dien, ... Metabolic engineering 35, 148-159, 2016 | 94 | 2016 |
| pyTFA and matTFA: a Python package and a Matlab toolbox for Thermodynamics-based Flux Analysis P Salvy, G Fengos, M Ataman, T Pathier, KC Soh, V Hatzimanikatis Bioinformatics 35 (1), 167-169, 2018 | 90 | 2018 |
| From network models to network responses: integration of thermodynamic and kinetic properties of yeast genome‐scale metabolic networks KC Soh, L Miskovic, V Hatzimanikatis FEMS yeast research 12 (2), 129-143, 2012 | 85 | 2012 |
| DREAMS of metabolism KC Soh, V Hatzimanikatis Trends in biotechnology 28 (10), 501-508, 2010 | 63 | 2010 |
| Constraining the Flux Space Using Thermodynamics and Integration of Metabolomics Data KC Soh, V Hatzimanikatis Metabolic Flux Analysis, 49-63, 2014 | 60 | 2014 |
| A design–build–test cycle using modeling and experiments reveals interdependencies between upper glycolysis and xylose uptake in recombinant S. cerevisiae and improves … L Miskovic, S Alff-Tuomala, KC Soh, D Barth, L Salusjärvi, JP Pitkänen, ... Biotechnology for biofuels 10 (1), 166, 2017 | 41 | 2017 |
| A computational framework for integration of lipidomics data into metabolic pathways N Hadadi, KC Soh, M Seijo, A Zisaki, X Guan, MR Wenk, V Hatzimanikatis Metabolic engineering 23, 1-8, 2014 | 21 | 2014 |
| Reconstruction of biological pathways and metabolic networks from in silico labeled metabolites N Hadadi, J Hafner, KC Soh, V Hatzimanikatis Biotechnology journal 12 (1), 2017 | 14 | 2017 |
| Computational Studies on Cellular Bioenergetics KC Soh EPFL, 2013 | 5 | 2013 |
| A novel approach to find the missing links in genome-scale metabolic models: The BridgeIt method M Seijo, KC Soh, V Hatzimanikatis | 2 | 2012 |
| Systematic Reduction of Genome Scale Metabolic Reconstructions-redGEM M Ataman, DF Hernandez Gardiol, G Fengos, KC Soh, V Hatzimanikatis 4th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2015), 2015 | | 2015 |
| Unraveling the inhibitory effects of acetate on ethanol production in CEN. PK A Chakrabarti, KC Soh, A Kiparissides, H van Rijsewijk, RB Bart, ... Metabolic Engineering X, 2014 | | 2014 |
| Implications of the Assumptions on Intracellular Metabolic Operational States in Metabolic Control Analysis G Fengos, A Chakrabarti, KC Soh, L Miskovic, V Hatzimanikatis Metabolic Engineering X, 2014 | | 2014 |
| Engineering improved productivity of 1, 4-butanediol in E. coli–a kinetic modeling approach S Andreozzi, A Chakrabarti, KC Soh, A Burgard, S Van Dien, L Miskovic, ... Metabolic Engineering X, 2014 | | 2014 |
| A Novel Approach to Design of Metabolic Engineering Strategiesa A Chakrabarti, G Fengos, M Ataman, KC Soh, L Miskovic, ... Metabolic Engineering X, 2014 | | 2014 |
| Unlocking Yeast Metabolism: Identification of optimal flux directionalities A Kiparissides, KC Soh, A Chakrabarti, L Miskovic, V Hatzimanikatis 2013 AIChE Annual Meeting, 2013 | | 2013 |
| In silico analysis of the interplay between P/O ratio and physiological states of the optimally grown Escherichia coli M Ataman, S Andreozzi, KC Soh, L Miskovic ICSB 2013, 2013 | | 2013 |
