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Osmar Norberto de Souza - labio.osmarnds@gmail.com
Osmar Norberto de Souza - labio.osmarnds@gmail.com
Head, Trunk, & Limbs - Laboratory for Bioinformatics, Modelling and Simulation of Biosystems - LABIO
Verified email at pucrs.br
Title
Cited by
Cited by
Year
Drugs that inhibit mycolic acid biosynthesis in Mycobacterium tuberculosis
EK Schroeder, O Norberto de Souza, DS Santos, JS Blanchard, LA Basso
Current Pharmaceutical Biotechnology 3 (3), 197-225, 2002
2242002
Effect of periodic box size on aqueous molecular dynamics simulation of a DNA dodecamer with particle-mesh Ewald method
O Norberto de Souza, RL Ornstein
Biophysical Journal 72 (6), 2395-2397, 1997
1381997
Determination of two structural forms of catalytic bridging ligand in zinc-phosphotriesterase by molecular dynamics simulation and quantum chemical calculation
CG Zhan, O Norberto de Souza, R Rittenhouse, RL Ornstein
Journal of the American Chemical Society 121 (32), 7279-7282, 1999
1031999
Discovery of New Inhibitors of Mycobacterium tuberculosis InhA Enzyme using Virtual Screening and a 3D-Pharmacophore-Based Approach
I Pauli, RN Santos, DC Rostirolla, LK Martinelli, RG Ducati, ...
Journal of Chemical Information and Modeling, 2013
992013
Crystallographic and pre-steady-state kinetics studies on binding of NADH to wild-type and isoniazid-resistant enoyl-ACP (CoA) reductase enzymes from Mycobacterium tuberculosis.
JS Oliveira, JH Pereira, F Canduri, NC Rodrigues, O Norberto de Souza, ...
Journal of Molecular Biology 359 (3), 646-666, 2006
932006
Molecular dynamics simulations of a protein-protein dimer: particle-mesh Ewald electrostatic model yields far superior results to standard cutoff model
O Norberto de Souza, RL Ornstein
Journal of Biomolecular Structure and Dynamics 16 (6), 1205-1218, 1999
841999
Molecular Dynamics Simulation Studies of the Wild-Type, I21V, and I16T Mutants of Isoniazid-Resistant Mycobacterium tuberculosis Enoyl Reductase (InhA) in Complex with NADH …
EK Schroeder, LA Basso, DS Santos, O Norberto de Souza
Biophysical Journal 89 (2), 876-884, 2005
812005
Protein Structure, Modelling and Applications
A Breda, NF Valadares, O Norberto de Souza, RC Garratt
National Center for Biotechnology Information (US), 2007
622007
A06. Protein Structure, Modelling and Applications
A Breda, NF Valadares, O Norberto de Souza, RC Garratt
Bioinformatics in Tropical Disease Research: A Practical and Case-Study …, 2007
62*2007
Inherent DNA curvature and flexibility correlate with TATA box functionality
O Norberto de Souza, RL Ornstein
Biopolymers 46 (6), 403-415, 1998
621998
Clustering Molecular Dynamics Trajectories for Optimizing Docking Experiments
R De Paris, CV Quevedo, DD Ruiz, O Norberto de Souza, RC Barros
582015
Slow-onset inhibition of 2-trans-enoyl-ACP (CoA) reductase from Mycobacterium tuberculosis by an inorganic complex
JS Oliveira, EHS de Sousa, O Norberto de Souza, DS Santos, LA Basso
Current Pharmaceutical Design 12 (19), 2409-2424, 2006
582006
Plasmodium falciparum histidine-rich protein II binds to actin, phosphatidylinositol 4, 5-bisphosphate and erythrocyte ghosts in a pH-dependent manner and undergoes coil-to …
CE Benedetti, J Kobarg, TA Pertinhez, RM Gatti, O Norberto de Souza, ...
Molecular and Biochemical Parasitology 128 (2), 157-166, 2003
412003
Effect of warmup protocol and sampling time on convergence of molecular dynamics simulations of a DNA dodecamer using AMBER 4.1 and particle-mesh Ewald method
O Norberto de Souza, RL Ornstein
Journal of Biomolecular Structure and Dynamics 14 (5), 607-611, 1997
381997
wFReDoW: A Cloud-based Web Environment to Handle Molecular Docking Simulations of a Fully-Flexible Receptor Model
R De Paris, FA Frantz, O Norberto de Souza, DDA Ruiz
BioMed Research International, 2013
362013
Evaluation of the impact of functional diversification on Poaceae, Brassicaceae, Fabaceae, and Pinaceae alcohol dehydrogenase enzymes
CE Thompson, CL Fernandes, O Norberto de Souza, LB de Freitas, ...
Journal of Molecular Modeling 16 (5), 919-928, 2010
342010
Sequence and structural aspects of the functional diversification of plant alcohol dehydrogenases
CE Thompson, FM Salzano, O Norberto de Souza, LB Freitas
Gene 396 (1), 108-115, 2007
332007
An Effective Approach for Clustering InhA Molecular Dynamics Trajectory Using Substrate-Binding Cavity Features
R De Paris, CV Quevedo, DDA Ruiz, O Norberto de Souza
PloS one 10 (7), e0133172, 2015
322015
Regioselectively controlled synthesis of 3 (5)-(trifluoromethyl) pyrazolylbenzenesulfonamides and their effects on a pathological pain model in mice
MM Lobo, SM Oliveira, I Brusco, P Machado, LFSM Timmers, ...
European Journal of Medicinal Chemistry, 2015
312015
Activity of 2-(quinolin-4-yloxy) acetamides in Mycobacterium tuberculosis clinical isolates and identification of their molecular target by whole-genome sequencing
FT Subtil, AD Villela, BL Abbadi, VS Rodrigues-Junior, CV Bizarro, ...
International Journal of Antimicrobial Agents 51 (3), 378-384, 2018
302018
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