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Elizabeth Purdom
Elizabeth Purdom
Associate Professor of Statistics, UC Berkeley
Verified email at stat.berkeley.edu - Homepage
Title
Cited by
Cited by
Year
Diversity of the human intestinal microbial flora
PB Eckburg, EM Bik, CN Bernstein, E Purdom, L Dethlefsen, M Sargent, ...
science 308 (5728), 1635-1638, 2005
98502005
Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1
RGW Verhaak, KA Hoadley, E Purdom, V Wang, Y Qi, MD Wilkerson, ...
Cancer cell 17 (1), 98-110, 2010
78882010
Comprehensive genomic characterization defines human glioblastoma genes and core pathways
Cancer Genome Atlas Research Network Tissue source sites: Duke University ...
Nature 455 (7216), 1061-1068, 2008
72952008
Integrated genomic analyses of ovarian carcinoma
Cancer Genome Atlas Research Network
Nature 474 (7353), 609, 2011
67672011
Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments
JH Bullard, E Purdom, KD Hansen, S Dudoit
BMC bioinformatics 11 (1), 1-13, 2010
20542010
Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics
K Street, D Risso, RB Fletcher, D Das, J Ngai, N Yosef, E Purdom, ...
BMC genomics 19, 1-16, 2018
17492018
Molecular analysis of the bacterial microbiota in the human stomach
EM Bik, PB Eckburg, SR Gill, KE Nelson, EA Purdom, F Francois, ...
Proceedings of the National Academy of Sciences 103 (3), 732-737, 2006
13182006
Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia
DH Brann, T Tsukahara, C Weinreb, M Lipovsek, K Van den Berge, ...
Science advances 6 (31), eabc5801, 2020
11582020
Subtype and pathway specific responses to anticancer compounds in breast cancer
LM Heiser, A Sadanandam, WL Kuo, SC Benz, TC Goldstein, S Ng, ...
Proceedings of the National Academy of Sciences 109 (8), 2724-2729, 2012
5362012
Drought and host selection influence bacterial community dynamics in the grass root microbiome
D Naylor, S DeGraaf, E Purdom, D Coleman-Derr
The ISME journal 11 (12), 2691-2704, 2017
4662017
Temporal dissection of tumorigenesis in primary cancers
S Durinck, C Ho, NJ Wang, W Liao, LR Jakkula, EA Collisson, J Pons, ...
Cancer discovery 1 (2), 137-143, 2011
2762011
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
2532021
Transcriptional programming of normal and inflamed human epidermis at single-cell resolution
JB Cheng, AJ Sedgewick, AI Finnegan, P Harirchian, J Lee, S Kwon, ...
Cell reports 25 (4), 871-883, 2018
2152018
Deconstructing olfactory stem cell trajectories at single-cell resolution
RB Fletcher, D Das, L Gadye, KN Street, A Baudhuin, A Wagner, MB Cole, ...
Cell stem cell 20 (6), 817-830. e8, 2017
2032017
Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
C Gao, L Montoya, L Xu, M Madera, J Hollingsworth, E Purdom, V Singan, ...
Nature Communications 11 (1), 34, 2020
2012020
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ...
Nature 598 (7879), 103-110, 2021
1872021
Phylogenetic analyses of melanoma reveal complex patterns of metastatic dissemination
JZ Sanborn, J Chung, E Purdom, NJ Wang, H Kakavand, JS Wilmott, ...
Proceedings of the National Academy of Sciences 112 (35), 10995-11000, 2015
1642015
FIRMA: a method for detection of alternative splicing from exon array data
E Purdom, KM Simpson, MD Robinson, JG Conboy, AV Lapuk, TP Speed
Bioinformatics 24 (15), 1707-1714, 2008
1582008
Performance assessment and selection of normalization procedures for single-cell RNA-seq
MB Cole, D Risso, A Wagner, D DeTomaso, J Ngai, E Purdom, S Dudoit, ...
Cell systems 8 (4), 315-328. e8, 2019
1482019
Exon-level microarray analyses identify alternative splicing programs in breast cancer
A Lapuk, H Marr, L Jakkula, H Pedro, S Bhattacharya, E Purdom, Z Hu, ...
Molecular Cancer Research 8 (7), 961-974, 2010
1452010
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Articles 1–20