Oliver Pybus

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Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Nuno Rodrigues FariaSir Henry Dale Fellow, Imperial College and University of OxfordVerified email at ic.ac.uk
Edward C HolmesUniversity of SydneyVerified email at sydney.edu.au
Philippe LemeyAssociate Professor, KU LeuvenVerified email at kuleuven.be
Jayna RaghwaniUniversity of OxfordVerified email at zoo.ox.ac.uk
Moritz U G KraemerUniversity of OxfordVerified email at zoo.ox.ac.uk
paul klenermanUniversity of OxfordVerified email at ndm.ox.ac.uk
Alexei J. DrummondProfessor of Computational Biology, University of AucklandVerified email at cs.auckland.ac.nz
Marc A. SuchardProfessor, University of California, Los AngelesVerified email at ucla.edu
Eleanor BarnesOxford UniversityVerified email at ndm.ox.ac.uk
Tommy Tsan-Yuk LamThe University of Hong KongVerified email at hku.hk
Aris KatzourakisProfessor of Evolution and Genomics, University of OxfordVerified email at zoo.ox.ac.uk
Ester Cerdeira SabinoUniversidade de Sao PauloVerified email at usp.br
Paul KellamImperial College London & Kymab LtdVerified email at imperial.ac.uk
José LourençoDepartmental Lecturer @ Department of Zoology, University of Oxford.Verified email at zoo.ox.ac.uk
Professor Andrew J TatemWorldPop, University of Southampton, UKVerified email at soton.ac.uk
Julien ThézéDepartment of Zoology, University of OxfordVerified email at zoo.ox.ac.uk
Sarah C HillResearch Fellow, Royal Veterinary College, UKVerified email at rvc.ac.uk
Simon DellicourUniversity of Bruxelles (ULB), University of Leuven (KU Leuven)Verified email at ulb.ac.be
Professor Ian BrownHead of Virology, APHAVerified email at apha.gov.uk

Oliver Pybus

University of Oxford / Royal Veterinary College

Verified email at zoo.ox.ac.uk - Homepage

Evolution Epidemiology Virology Genomics Phylodynamics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Bayesian coalescent inference of past population dynamics from molecular sequences AJ Drummond, A Rambaut, B Shapiro, OG Pybus Molecular Biology and Evolution 22 (5), 1185-1192, 2005	2760	2005
Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic GJD Smith, D Vijaykrishna, J Bahl, SJ Lycett, M Worobey, OG Pybus, ... Nature 459 (7250), 1122-1125, 2009	2333	2009
Pandemic potential of a strain of influenza A (H1N1): early findings C Fraser, CA Donnelly, S Cauchemez, WP Hanage, MD Van Kerkhove, ... Science 324 (5934), 1557-1561, 2009	2252	2009
Global distribution and prevalence of hepatitis C virus genotypes JP Messina, I Humphreys, A Flaxman, A Brown, GS Cooke, OG Pybus, ... Hepatology 61 (1), 77-87, 2015	1673	2015
The effect of human mobility and control measures on the COVID-19 epidemic in China MUG Kraemer, CH Yang, B Gutierrez, CH Wu, B Klein, DM Pigott, ... Science 368 (6490), 493-497, 2020	1302	2020
Unifying the epidemiological and evolutionary dynamics of pathogens BT Grenfell, OG Pybus, JR Gog, JLN Wood, JM Daly, JA Mumford, ... Science 303 (5656), 327-332, 2004	1230	2004
An investigation of transmission control measures during the first 50 days of the COVID-19 epidemic in China H Tian, Y Liu, Y Li, CH Wu, B Chen, MUG Kraemer, B Li, J Cai, B Xu, ... Science 368 (6491), 638-642, 2020	1020	2020
The genomic and epidemiological dynamics of human influenza A virus A Rambaut, OG Pybus, MI Nelson, C Viboud, JK Taubenberger, ... Nature 453 (7195), 615-619, 2008	958	2008
Zika virus in the Americas: early epidemiological and genetic findings NR Faria, RS da Silva Azevedo, MUG Kraemer, R Souza, MS Cunha, ... Science 352 (6283), 345-349, 2016	951	2016
Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen) A Rambaut, TT Lam, L Max Carvalho, OG Pybus Virus Evolution 2 (1), vew007, 2016	870	2016
Testing macro–evolutionary models using incomplete molecular phylogenies OG Pybus, PH Harvey Proceedings of the Royal Society B: Biological Sciences 267 (1459), 2267-2272, 2000	785	2000
Rise and fall of the Beringian steppe bison B Shapiro, AJ Drummond, A Rambaut, MC Wilson, PE Matheus, AV Sher, ... Science 306 (5701), 1561-1565, 2004	715	2004
The early spread and epidemic ignition of HIV-1 in human populations NR Faria, A Rambaut, MA Suchard, G Baele, T Bedford, MJ Ward, ... Science 346 (6205), 56-61, 2014	670	2014
Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis GM Jenkins, A Rambaut, OG Pybus, EC Holmes Journal of Molecular Evolution 54 (2), 156-165, 2002	669	2002
A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology A Rambaut, EC Holmes, Á O’Toole, V Hill, JT McCrone, C Ruis, ... Nature Microbiology 5 (11), 1403-1407, 2020	650	2020
Tracing the origin and history of the HIV-2 epidemic P Lemey, OG Pybus, B Wang, NK Saksena, M Salemi, AM Vandamme Proceedings of the National Academy of Sciences 100 (11), 6588-6592, 2003	538	2003
Recent epidemic of acute hepatitis C virus in HIV-positive men who have sex with men linked to high-risk sexual behaviours M Danta, D Brown, S Bhagani, OG Pybus, CA Sabin, M Nelson, M Fisher, ... AIDS 21 (8), 983-991, 2007	534	2007
Evolutionary analysis of the dynamics of viral infectious disease OG Pybus, A Rambaut Nature Reviews Genetics 10 (8), 540-550, 2009	517	2009
Adaptation of HIV-1 to human leukocyte antigen class I Y Kawashima, K Pfafferott, J Frater, P Matthews, R Payne, M Addo, ... Nature 458 (7238), 641-645, 2009	515	2009
The epidemic behavior of the hepatitis C virus OG Pybus, MA Charleston, S Gupta, A Rambaut, EC Holmes, PH Harvey Science 292 (5525), 2323-2325, 2001	503	2001

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