Yasuo Tabei

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	All	Since 2016
Citations	1048	637
h-index	20	16
i10-index	27	24

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20062007200820092010201120122013201420152016201720182019202020214 9 34 29 19 28 48 53 82 101 113 109 124 103 159 28

Co-authors

Yoshihiro YamanishiKyushu Institute of TechnologyVerified email at bio.kyutech.ac.jp
Koji TsudaProfessor, GSFS, The University of TokyoVerified email at k.u-tokyo.ac.jp
Kiyoshi AsaiProfessor of Computational Biology, University of TokyoVerified email at k.u-tokyo.ac.jp
Masaaki KoteraPreferred Networks Inc., | University of TokyoVerified email at preferred.jp
Hiroshi SakamotoKyushu Institute of TechnologyVerified email at ai.kyutech.ac.jp
Simon J. PuglisiAssociate Professor, Department of Computer Science, University of HelsinkiVerified email at cs.helsinki.fi
Kana ShimizuWaseda University, National Institute of Advanced Industrial Science and TechnologyVerified email at waseda.jp
Kentaro TomiiAISTVerified email at aist.go.jp
Susumu GotoDatabase Center for Life Science, Research Organization of Information and SystemsVerified email at dbcls.rois.ac.jp
djamal belazzouguiCERISTVerified email at cerist.dz
Juha KärkkäinenDepartment of Computer scienceVerified email at cs.helsinki.fi
Travis GagieAssociate Professor at Dalhousie UniversityVerified email at dal.ca
Alberto Ordóñez PereiraPinterestVerified email at pinterest.com
Paweł GawrychowskiUniversity of WrocławVerified email at cs.uni.wroc.pl
Moriya YukiDatabase Center for Life ScienceVerified email at dbcls.rois.ac.jp
Kazuhiro TakemotoKyushu Institute of TechnologyVerified email at bio.kyutech.ac.jp
Hiroto SaigoKyushu UniversityVerified email at inf.kyushu-u.ac.jp
Kunihiko SadakaneProfessor at Department of Mathematical Informatics, The University of TokyoVerified email at mist.i.u-tokyo.ac.jp
Naoya TakeishiUniversity of Applied Sciences and Arts Western Switzerland (HES-SO), GenevaVerified email at hesge.ch
Yoshinobu KawaharaProfessor, IMI, Kyushu University / Team Leader, AIP Center, RIKENVerified email at imi.kyushu-u.ac.jp

Yasuo Tabei

Unit leader, RIKEN Center for Advanced Intelligence Project (AIP)

Verified email at riken.go.jp - Homepage

Data mining Machine learning Data structure Bioinformatics Chemoinformatics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
A fast structural multiple alignment method for long RNA sequences Y Tabei, H Kiryu, T Kin, K Asai BMC bioinformatics 9 (1), 1-17, 2008	101	2008
Murlet: a practical multiple alignment tool for structural RNA sequences H Kiryu, Y Tabei, T Kin, K Asai Bioinformatics 23 (13), 1588-1598, 2007	90	2007
Identification of chemogenomic features from drug–target interaction networks using interpretable classifiers Y Tabei, E Pauwels, V Stoven, K Takemoto, Y Yamanishi Bioinformatics 28 (18), i487-i494, 2012	72	2012
SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments Y Tabei, K Tsuda, T Kin, K Asai Bioinformatics 22 (14), 1723-1729, 2006	70	2006
PoSSuM: a database of similar protein–ligand binding and putative pockets JI Ito, Y Tabei, K Shimizu, K Tsuda, K Tomii Nucleic acids research 40 (D1), D541-D548, 2012	48	2012
Queries on LZ-bounded encodings D Belazzougui, T Gagie, P Gawrychowski, J Kärkkäinen, A Ordónez, ... 2015 Data Compression Conference, 83-92, 2015	43	2015
Scalable prediction of compound-protein interactions using minwise hashing Y Tabei, Y Yamanishi BMC systems biology 7 (6), 1-13, 2013	42	2013
Fully-online grammar compression S Maruyama, Y Tabei, H Sakamoto, K Sadakane International Symposium on String Processing and Information Retrieval, 218-229, 2013	42	2013
Bayesian Dynamic Mode Decomposition. N Takeishi, Y Kawahara, Y Tabei, T Yairi IJCAI, 2814-2821, 2017	41	2017
Improved ESP-index: a practical self-index for highly repetitive texts Y Takabatake, Y Tabei, H Sakamoto International Symposium on Experimental Algorithms, 2014	36	2014
Supervised de novo reconstruction of metabolic pathways from metabolome-scale compound sets M Kotera, Y Tabei, Y Yamanishi, T Tokimatsu, S Goto Bioinformatics 29 (13), i135-i144, 2013	34	2013
Access, rank, and select in grammar-compressed strings D Belazzougui, PH Cording, SJ Puglisi, Y Tabei Algorithms-ESA 2015, 142-154, 2015	33	2015
PDB‐scale analysis of known and putative ligand‐binding sites with structural sketches JI Ito, Y Tabei, K Shimizu, K Tomii, K Tsuda Proteins: Structure, Function, and Bioinformatics 80 (3), 747-763, 2012	30	2012
Predicting inhibitory and activatory drug targets by chemically and genetically perturbed transcriptome signatures R Sawada, M Iwata, Y Tabei, H Yamato, Y Yamanishi Scientific reports 8 (1), 1-9, 2018	26	2018
Inferring protein domains associated with drug side effects based on drug-target interaction network H Iwata, S Mizutani, Y Tabei, M Kotera, S Goto, Y Yamanishi BMC systems biology 7 (6), 1-11, 2013	26	2013
KCF-S: KEGG Chemical Function and Substructure for improved interpretability and prediction in chemical bioinformatics M Kotera, Y Tabei, Y Yamanishi, Y Moriya, T Tokimatsu, M Kanehisa, ... BMC systems biology 7 (6), 1-17, 2013	22	2013
A succinct grammar compression Y Tabei, Y Takabatake, H Sakamoto Annual Symposium on Combinatorial Pattern Matching, 235-246, 2013	22	2013
Single versus multiple sorting in all pairs similarity search Y Tabei, T Uno, M Sugiyama, K Tsuda Proceedings of 2nd Asian Conference on Machine Learning, 145-160, 2010	22	2010
Fully online grammar compression in constant space S Maruyama, Y Tabei 2014 Data Compression Conference, 173-182, 2014	21	2014
A local multiple alignment method for detection of non-coding RNA sequences Y Tabei, K Asai Bioinformatics 25 (12), 1498-1505, 2009	21	2009

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