Manfred Grabherr
Manfred Grabherr
Senior Researcher and Team Leader, Uppsala University
Verified email at imbim.uu.se
TitleCited byYear
Full-length transcriptome assembly from RNA-Seq data without a reference genome
MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ...
Nature biotechnology 29 (7), 644, 2011
81172011
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
BJ Haas, A Papanicolaou, M Yassour, M Grabherr, PD Blood, J Bowden, ...
Nature protocols 8 (8), 1494, 2013
30802013
Genome sequence, comparative analysis and haplotype structure of the domestic dog
K Lindblad-Toh, CM Wade, TS Mikkelsen, EK Karlsson, DB Jaffe, ...
Nature 438 (7069), 803, 2005
22162005
Evolution of genes and genomes on the Drosophila phylogeny
Drosophila 12 Genomes Consortium
Nature 450 (7167), 203, 2007
17702007
The genomic basis of adaptive evolution in threespine sticklebacks
FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, ...
Nature 484 (7392), 55, 2012
11202012
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
BJ Haas, S Kamoun, MC Zody, RHY Jiang, RE Handsaker, LM Cano, ...
Nature 461 (7262), 393, 2009
10782009
Genome sequence of Aedes aegypti, a major arbovirus vector
V Nene, JR Wortman, D Lawson, B Haas, C Kodira, ZJ Tu, B Loftus, Z Xi, ...
Science 316 (5832), 1718-1723, 2007
10312007
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
LJ Ma, HC Van Der Does, KA Borkovich, JJ Coleman, MJ Daboussi, ...
Nature 464 (7287), 367, 2010
10122010
Computational methods for transcriptome annotation and quantification using RNA-seq
M Garber, MG Grabherr, M Guttman, C Trapnell
Nature methods 8 (6), 469, 2011
8782011
Evolution of pathogenicity and sexual reproduction in eight Candida genomes
G Butler, MD Rasmussen, MF Lin, MAS Santos, S Sakthikumar, CA Munro, ...
Nature 459 (7247), 657, 2009
8002009
Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences
TS Mikkelsen, MJ Wakefield, B Aken, CT Amemiya, JL Chang, S Duke, ...
Nature 447 (7141), 167, 2007
6412007
Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data
MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ...
Nature biotechnology 29 (7), 644, 2011
6092011
Obligate biotrophy features unraveled by the genomic analysis of rust fungi
S Duplessis, CA Cuomo, YC Lin, A Aerts, E Tisserant, C Veneault-Fourrey, ...
Proceedings of the National Academy of Sciences 108 (22), 9166-9171, 2011
4512011
The genome of the green anole lizard and a comparative analysis with birds and mammals
J Alföldi, F Di Palma, M Grabherr, C Williams, L Kong, E Mauceli, ...
Nature 477 (7366), 587, 2011
4412011
Evolution of Darwin’s finches and their beaks revealed by genome sequencing
S Lamichhaney, J Berglund, MS Almén, K Maqbool, M Grabherr, ...
Nature 518 (7539), 371, 2015
4242015
The genomic landscape underlying phenotypic integrity in the face of gene flow in crows
JW Poelstra, N Vijay, CM Bossu, H Lantz, B Ryll, I Müller, V Baglione, ...
Science 344 (6190), 1410-1414, 2014
3422014
Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication
LJ Ma, AS Ibrahim, C Skory, MG Grabherr, G Burger, M Butler, M Elias, ...
PLoS genetics 5 (7), e1000549, 2009
2592009
A cis-acting regulatory mutation causes premature hair graying and susceptibility to melanoma in the horse
GR Pielberg, A Golovko, E Sundström, I Curik, J Lennartsson, ...
Nature genetics 40 (8), 1004, 2008
2252008
Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring
S Lamichhaney, AM Barrio, N Rafati, G Sundström, CJ Rubin, ER Gilbert, ...
Proceedings of the National Academy of Sciences 109 (47), 19345-19350, 2012
1822012
An improved canine genome and a comprehensive catalogue of coding genes and non-coding transcripts
MP Hoeppner, A Lundquist, M Pirun, JRS Meadows, N Zamani, ...
PloS one 9 (3), e91172, 2014
1102014
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Articles 1–20