Raphael Eisenhofer
Raphael Eisenhofer
Centre for Evolutionary Hologenomics, University of Copenhagen
Verified email at - Homepage
Cited by
Cited by
Contamination in low microbial biomass microbiome studies: issues and recommendations
R Eisenhofer, JJ Minich, C Marotz, A Cooper, R Knight, LS Weyrich
Trends in microbiology 27 (2), 105-117, 2019
Laboratory contamination over time during low‐biomass sample analysis
LS Weyrich, AG Farrer, R Eisenhofer, LA Arriola, J Young, CA Selway, ...
Molecular ecology resources 19 (4), 982-996, 2019
Assessing alignment-based taxonomic classification of ancient microbial DNA
R Eisenhofer, LS Weyrich
PeerJ 7, e6594, 2019
Microbiome applications for pathology: challenges of low microbial biomass samples during diagnostic testing
CA Selway, R Eisenhofer, LS Weyrich
The Journal of Pathology: Clinical Research 6 (2), 97-106, 2020
Investigating the demographic history of Japan using ancient oral microbiota
R Eisenhofer, H Kanzawa-Kiriyama, K Shinoda, LS Weyrich
Philosophical Transactions of the Royal Society B 375 (1812), 20190578, 2020
An optimized method for the extraction of ancient eukaryote DNA from marine sediments
L Armbrecht, S Herrando‐Pérez, R Eisenhofer, GM Hallegraeff, ...
Molecular Ecology Resources 20 (4), 906-919, 2020
Reply to Santiago-Rodriguez et al.: proper authentication of ancient DNA is essential
R Eisenhofer, A Cooper, LS Weyrich
FEMS Microbiology Ecology 93 (5), fix042, 2017
Ancient microbial DNA in dental calculus: a new method for studying rapid human migration events
R Eisenhofer, A Anderson, K Dobney, A Cooper, LS Weyrich
The Journal of Island and Coastal Archaeology 14 (2), 149-162, 2019
Signatures of landscape and captivity in the gut microbiota of Southern Hairy-nosed Wombats (Lasiorhinus latifrons)
R Eisenhofer, KM Helgen, D Taggart
Animal microbiome 3 (1), 1-14, 2021
Host reproductive cycle influences the pouch microbiota of wild southern hairy-nosed wombats (Lasiorhinus latifrons)
S Weiss, D Taggart, I Smith, K Helgen, M, R Eisenhofer
Animal Microbiome, 2021
Proper authentication of ancient DNA is still essential
R Eisenhofer, LS Weyrich
Genes 9 (3), 122, 2018
Effectiveness of decontamination protocols when analyzing ancient DNA preserved in dental calculus
AG Farrer, SL Wright, E Skelly, R Eisenhofer, K Dobney, LS Weyrich
Scientific reports 11 (1), 1-14, 2021
Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics
L Armbrecht, R Eisenhofer, J Utge, EC Sibert, F Rocha, R Ward, ...
ISME Communications 1 (1), 1-10, 2021
Isolating viable ancient bacteria: what you put in is what you get out
R Eisenhofer, A Cooper, LS Weyrich
Genome Announcements 4 (4), e00712-16, 2016
Impact of microbial genome completeness on functional metagenomics
R Eisenhofer, I Odriozola, A Alberdi
Individuality and stability of the koala (Phascolarctos cinereus) faecal microbiota through time
R Eisenhofer, KL Brice, MDJ Blyton, SE Bevins, K Leigh, BK Singh, ...
Microbial biogeography of the wombat gastrointestinal tract
R Eisenhofer, E D’Agnese, D Taggart, S Carver, B Penrose
PeerJ 10, e12982, 2022
Characterising the Gut Microbiomes in Wild and Captive Short-Beaked Echidnas Reveals Diet-Associated Changes
T Perry, E West, R Eisenhofer, A Stenhouse, I Wilson, B Laming, ...
Frontiers in Microbiology 13, 2022
Neanderthals did not likely consume Physcomitrium patens–a model moss species
FB Haas, R Eisenhofer, M Schreiber, LS Weyrich, SA Rensing
bioRxiv, 2022
Fossils: A new home for microbes
R Eisenhofer, A Cooper
Elife 8, e48493, 2019
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