Michael Imelfort
Michael Imelfort
none
Verified email at uts.edu.au
TitleCited byYear
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
DH Parks, M Imelfort, CT Skennerton, P Hugenholtz, GW Tyson
Genome research 25 (7), 1043-1055, 2015
14892015
Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage
MF Haroon, S Hu, Y Shi, M Imelfort, J Keller, P Hugenholtz, Z Yuan, ...
Nature 500 (7464), 567, 2013
5932013
Fast, accurate error-correction of amplicon pyrosequences using Acacia
L Bragg, G Stone, M Imelfort, P Hugenholtz, GW Tyson
Nature methods 9 (5), 425, 2012
3172012
GroopM: an automated tool for the recovery of population genomes from related metagenomes
M Imelfort, D Parks, BJ Woodcroft, P Dennis, P Hugenholtz, GW Tyson
PeerJ 2, e603, 2014
1942014
An expanded genomic representation of the phylum Cyanobacteria
RM Soo, CT Skennerton, Y Sekiguchi, M Imelfort, SJ Paech, PG Dennis, ...
Genome biology and evolution 6 (5), 1031-1045, 2014
1542014
Discovering genetic polymorphisms in next‐generation sequencing data
M Imelfort, C Duran, J Batley, D Edwards
Plant biotechnology journal 7 (4), 312-317, 2009
1392009
De novo sequencing of plant genomes using second-generation technologies
M Imelfort, D Edwards
Briefings in Bioinformatics 10 (6), 609-618, 2009
1302009
Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS
PJ Berkman, A Skarshewski, MT Lorenc, K Lai, C Duran, EYS Ling, ...
Plant biotechnology journal 9 (7), 768-775, 2011
1152011
AutoSNPdb: an annotated single nucleotide polymorphism database for crop plants
C Duran, N Appleby, T Clark, D Wood, M Imelfort, J Batley, D Edwards
Nucleic Acids Research 37 (suppl_1), D951-D953, 2008
932008
Single nucleotide polymorphism discovery in barley using autoSNPdb
C Duran, N Appleby, M Vardy, M Imelfort, D Edwards, J Batley
Plant biotechnology journal 7 (4), 326-333, 2009
732009
Bioinformatics tools and databases for analysis of next-generation sequence data
HC Lee, K Lai, MT Lorenc, M Imelfort, C Duran, D Edwards
Briefings in functional genomics 11 (1), 12-24, 2011
702011
Crass: identification and reconstruction of CRISPR from unassembled metagenomic data
CT Skennerton, M Imelfort, GW Tyson
Nucleic acids research 41 (10), e105-e105, 2013
652013
Capturing the biofuel wellhead and powerhouse: the chloroplast and mitochondrial genomes of the leguminous feedstock tree Pongamia pinnata
SH Kazakoff, M Imelfort, D Edwards, J Koehorst, B Biswas, J Batley, ...
PLoS One 7 (12), e51687, 2012
582012
Future tools for association mapping in crop plants
C Duran, D Eales, D Marshall, M Imelfort, J Stiller, PJ Berkman, T Clark, ...
Genome 53 (11), 1017-1023, 2010
522010
Inferring short tandem repeat variation from paired-end short reads
MD Cao, E Tasker, K Willadsen, M Imelfort, S Vishwanathan, ...
Nucleic acids research 42 (3), e16-e16, 2013
452013
Spatial uniformity of microbial diversity in a continuous bioelectrochemical system
PG Dennis, K Guo, M Imelfort, P Jensen, GW Tyson, K Rabaey
Bioresource technology 129, 599-605, 2013
372013
Genome sequencing approaches and successes
M Imelfort, J Batley, S Grimmond, D Edwards
Plant Genomics, 345-358, 2009
372009
The ReFuGe 2020 Consortium—using “omics” approaches to explore the adaptability and resilience of coral holobionts to environmental change
CR Voolstra, DJ Miller, MA Ragan, A Hoffmann, O Hoegh-Guldberg, ...
Frontiers in Marine Science 2, 68, 2015
352015
Targeted identification of genomic regions using TAGdb
DJ Marshall, A Hayward, D Eales, M Imelfort, J Stiller, PJ Berkman, ...
Plant Methods 6 (1), 19, 2010
352010
CMap3D: a 3D visualization tool for comparative genetic maps
C Duran, Z Boskovic, M Imelfort, J Batley, NA Hamilton, D Edwards
Bioinformatics 26 (2), 273-274, 2009
182009
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Articles 1–20