| Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB TZ DeSantis, P Hugenholtz, N Larsen, M Rojas, EL Brodie, K Keller, ... Appl. Environ. Microbiol. 72 (7), 5069-5072, 2006 | 6704 | 2006 |
| Structure, function and diversity of the healthy human microbiome C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ... nature 486 (7402), 207, 2012 | 4654 | 2012 |
| An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea D McDonald, MN Price, J Goodrich, EP Nawrocki, TZ DeSantis, A Probst, ... The ISME journal 6 (3), 610, 2012 | 2609 | 2012 |
| PyNAST: a flexible tool for aligning sequences to a template alignment JG Caporaso, K Bittinger, FD Bushman, TZ DeSantis, GL Andersen, ... Bioinformatics 26 (2), 266-267, 2009 | 2580 | 2009 |
| Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons BJ Haas, D Gevers, AM Earl, M Feldgarden, DV Ward, G Giannoukos, ... Genome research 21 (3), 494-504, 2011 | 1837 | 2011 |
| A framework for human microbiome research BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ... nature 486 (7402), 215, 2012 | 1245 | 2012 |
| Deciphering the rhizosphere microbiome for disease-suppressive bacteria R Mendes, M Kruijt, I De Bruijn, E Dekkers, M van der Voort, ... Science 332 (6033), 1097-1100, 2011 | 1103 | 2011 |
| NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes TZ DeSantis, P Hugenholtz, K Keller, EL Brodie, N Larsen, YM Piceno, ... Nucleic acids research 34 (suppl_2), W394-W399, 2006 | 986 | 2006 |
| Deep-sea oil plume enriches indigenous oil-degrading bacteria TC Hazen, EA Dubinsky, TZ DeSantis, GL Andersen, YM Piceno, N Singh, ... Science 330 (6001), 204-208, 2010 | 915 | 2010 |
| Urban aerosols harbor diverse and dynamic bacterial populations EL Brodie, TZ DeSantis, JPM Parker, IX Zubietta, YM Piceno, ... Proceedings of the National Academy of Sciences 104 (1), 299-304, 2007 | 622 | 2007 |
| High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment TZ DeSantis, EL Brodie, JP Moberg, IX Zubieta, YM Piceno, GL Andersen Microbial ecology 53 (3), 371-383, 2007 | 507 | 2007 |
| Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers Z Liu, TZ DeSantis, GL Andersen, R Knight Nucleic acids research 36 (18), e120-e120, 2008 | 498 | 2008 |
| Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation EL Brodie, TZ DeSantis, DC Joyner, SM Baek, JT Larsen, GL Andersen, ... Appl. Environ. Microbiol. 72 (9), 6288-6298, 2006 | 490 | 2006 |
| Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma YJ Huang, CE Nelson, EL Brodie, TZ DeSantis, MS Baek, J Liu, T Woyke, ... Journal of Allergy and Clinical Immunology 127 (2), 372-381. e3, 2011 | 472 | 2011 |
| Chronic kidney disease alters intestinal microbial flora ND Vaziri, J Wong, M Pahl, YM Piceno, J Yuan, TZ DeSantis, Z Ni, ... Kidney international 83 (2), 308-315, 2013 | 451 | 2013 |
| Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ... Nature biotechnology 29 (5), 415, 2011 | 380 | 2011 |
| Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys JJ Werner, O Koren, P Hugenholtz, TZ DeSantis, WA Walters, ... The ISME journal 6 (1), 94, 2012 | 357 | 2012 |
| Environmental genomics reveals a single-species ecosystem deep within Earth D Chivian, EL Brodie, EJ Alm, DE Culley, PS Dehal, TZ DeSantis, ... Science 322 (5899), 275-278, 2008 | 355 | 2008 |
| Sequence-specific identification of 18 pathogenic microorganisms using microarray technology WJ Wilson, CL Strout, TZ DeSantis, JL Stilwell, AV Carrano, GL Andersen Molecular and cellular probes 16 (2), 119-127, 2002 | 353 | 2002 |
| High-density microarray of small-subunit ribosomal DNA probes KH Wilson, WJ Wilson, JL Radosevich, TZ DeSantis, VS Viswanathan, ... Appl. Environ. Microbiol. 68 (5), 2535-2541, 2002 | 341 | 2002 |