| Inferred allelic variants of immunoglobulin receptor genes: a system for their evaluation, documentation, and naming M Ohlin, C Scheepers, M Corcoran, WD Lees, CE Busse, D Bagnara, ... Frontiers in immunology 10, 441872, 2019 | 58 | 2019 |
| A computational analysis of the antigenic properties of haemagglutinin in influenza A H3N2 WD Lees, DS Moss, AJ Shepherd Bioinformatics 26 (11), 1403-1408, 2010 | 56 | 2010 |
| Diversity in immunogenomics: the value and the challenge K Peng, Y Safonova, M Shugay, AB Popejoy, OL Rodriguez, F Breden, ... Nature methods 18 (6), 588-591, 2021 | 48 | 2021 |
| Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences E Smakaj, L Babrak, M Ohlin, M Shugay, B Briney, D Tosoni, C Galli, ... Bioinformatics 36 (6), 1731-1739, 2020 | 45 | 2020 |
| OGRDB: a reference database of inferred immune receptor genes W Lees, CE Busse, M Corcoran, M Ohlin, C Scheepers, FA Matsen IV, ... Nucleic acids research 48 (D1), D964-D970, 2020 | 38 | 2020 |
| Germline immunoglobulin genes: disease susceptibility genes hidden in plain sight? AM Collins, G Yaari, AJ Shepherd, W Lees, CT Watson Current Opinion in Systems Biology 24, 100-108, 2020 | 34 | 2020 |
| VDJbase: an adaptive immune receptor genotype and haplotype database A Omer, O Shemesh, A Peres, P Polak, AJ Shepherd, CT Watson, ... Nucleic acids research 48 (D1), D1051-D1056, 2020 | 32 | 2020 |
| T cell receptor beta germline variability is revealed by inference from repertoire data A Omer, A Peres, OL Rodriguez, CT Watson, W Lees, P Polak, AM Collins, ... Genome medicine 14, 1-19, 2022 | 27 | 2022 |
| sumrep: A Summary Statistic Framework for Immune Receptor Repertoire Comparison and Model Validation BJ Olson, P Moghimi, CA Schramm, A Obraztsova, D Ralph, ... Frontiers in immunology 10, 2533, 2019 | 27 | 2019 |
| Flexibility and intrinsic disorder are conserved features of hepatitis C virus E2 glycoprotein L Stejskal, WD Lees, DS Moss, M Palor, RJ Bingham, AJ Shepherd, ... PLOS Computational Biology 16 (2), e1007710, 2020 | 22 | 2020 |
| Commentary on Population matched (pm) germline allelic variants of immunoglobulin (IG) loci: relevance in infectious diseases and vaccination studies in human populations AM Collins, A Peres, MM Corcoran, CT Watson, G Yaari, WD Lees, ... Genes & Immunity 22 (7), 335-338, 2021 | 20 | 2021 |
| Evaluation of a novel multi-immunogen vaccine strategy for targeting 4E10/10E8 neutralizing epitopes on HIV-1 gp41 membrane proximal external region S Banerjee, H Shi, M Banasik, H Moon, W Lees, Y Qin, A Harley, ... Virology 505, 113-126, 2017 | 19 | 2017 |
| Utilities for high-throughput analysis of B-cell clonal lineages WD Lees, AJ Shepherd Journal of immunology research 2015, 2015 | 17 | 2015 |
| investigating substitutions in antibody–antigen complexes Using Molecular Dynamics: a case study with Broad-spectrum, influenza a antibodies WD Lees, L Stejskal, DS Moss, AJ Shepherd Frontiers in Immunology 8, 244887, 2017 | 15 | 2017 |
| N-Linked glycans on influenza A H3N2 hemagglutinin constrain binding of host antibodies, but shielding is limited K Pentiah, WD Lees, DS Moss, AJ Shepherd Glycobiology 25 (1), 124-132, 2015 | 14 | 2015 |
| Analysis of antigenically important residues in human influenza A virus in terms of B-cell epitopes WD Lees, DS Moss, AJ Shepherd Journal of virology 85 (17), 8548-8555, 2011 | 14 | 2011 |
| An entropic safety catch controls hepatitis C virus entry and antibody resistance L Stejskal, MD Kalemera, CB Lewis, M Palor, L Walker, T Daviter, ... Elife 11, e71854, 2022 | 10 | 2022 |
| A BALB/c IGHV reference set, defined by haplotype analysis of long-read VDJ-c sequences from F1 (BALB/cx C57BL/6) mice KJL Jackson, JT Kos, W Lees, WS Gibson, ML Smith, A Peres, G Yaari, ... Frontiers in Immunology 13, 888555, 2022 | 10 | 2022 |
| Increased epitope complexity correlated with antibody affinity maturation and a novel binding mode revealed by structures of rabbit antibodies against the third variable loop … R Pan, Y Qin, M Banasik, W Lees, AJ Shepherd, MW Cho, XP Kong Journal of virology 92 (7), 10.1128/jvi. 01894-17, 2018 | 10 | 2018 |
| Studying antibody repertoires with next-generation sequencing WD Lees, AJ Shepherd Bioinformatics: Volume II: Structure, Function, and Applications, 257-270, 2017 | 9 | 2017 |
Adrian J ShepherdEmeritus Professor of Computational Biology, Birkbeck, University of LondonVerified email at mail.cryst.bbk.ac.uk
