|Organization and sequence analysis of the 2, 4-dichlorophenol hydroxylase and dichlorocatechol oxidative operons of plasmid pJP4|
EJ Perkins, MP Gordon, O Caceres, PF Lurquin
Journal of Bacteriology 172 (5), 2351-2359, 1990
|Toxicogenomics in regulatory ecotoxicology|
GT Ankley, GP Daston, SJ Degitz, ND Denslow, RA Hoke, SW Kennedy, ...
Environmental science & technology 40 (13), 4055-4065, 2006
|Endocrine disrupting chemicals in fish: developing exposure indicators and predictive models of effects based on mechanism of action|
GT Ankley, DC Bencic, MS Breen, TW Collette, RB Conolly, ND Denslow, ...
Aquatic Toxicology 92 (3), 168-178, 2009
|Daphnia magna ecotoxicogenomics provides mechanistic insights into metal toxicity|
HC Poynton, JR Varshavsky, B Chang, G Cavigiolio, S Chan, PS Holman, ...
Environmental science & technology 41 (3), 1044-1050, 2007
|Succession of phenotypic, genotypic, and metabolic community characteristics during in vitro bioslurry treatment of polycyclic aromatic hydrocarbon-contaminated sediments|
DB Ringelberg, JW Talley, EJ Perkins, SG Tucker, RG Luthy, EJ Bouwer, ...
Applied and Environmental Microbiology 67 (4), 1542-1550, 2001
|How adverse outcome pathways can aid the development and use of computational prediction models for regulatory toxicology|
C Wittwehr, H Aladjov, G Ankley, HJ Byrne, J de Knecht, E Heinzle, ...
Toxicological Sciences 155 (2), 326-336, 2017
|Comparison of probabilistic Boolean network and dynamic Bayesian network approaches for inferring gene regulatory networks|
P Li, C Zhang, EJ Perkins, P Gong, Y Deng
BMC bioinformatics 8 (7), 1-8, 2007
|Quantitative adverse outcome pathways and their application to predictive toxicology|
RB Conolly, GT Ankley, WY Cheng, ML Mayo, DH Miller, EJ Perkins, ...
Environmental science & technology 51 (8), 4661-4672, 2017
|Gene Expression Profiling in Daphnia magna Part I: Concentration-Dependent Profiles Provide Support for the No Observed Transcriptional Effect Level|
HC Poynton, AV Loguinov, JR Varshavsky, S Chan, EJ Perkins, CD Vulpe
Environmental science & technology 42 (16), 6250-6256, 2008
|The role of omics in the application of adverse outcome pathways for chemical risk assessment|
EK Brockmeier, G Hodges, TH Hutchinson, E Butler, M Hecker, ...
Toxicological Sciences 158 (2), 252-262, 2017
|Systems biology: leading the revolution in ecotoxicology|
N Garcia‐Reyero, EJ Perkins
Environmental toxicology and chemistry 30 (2), 265-273, 2011
|Ecotoxicogenomics to support ecological risk assessment: a case study with bisphenol A in fish|
DL Villeneuve, N Garcia-Reyero, BL Escalon, KM Jensen, JE Cavallin, ...
Environmental science & technology 46 (1), 51-59, 2012
|Current perspectives on the use of alternative species in human health and ecological hazard assessments|
EJ Perkins, GT Ankley, KM Crofton, N Garcia-Reyero, CA LaLone, ...
Environmental health perspectives 121 (9), 1002-1010, 2013
|Gene expression responses in male fathead minnows exposed to binary mixtures of an estrogen and antiestrogen|
N Garcia-Reyero, KJ Kroll, L Liu, EF Orlando, KH Watanabe, ...
BMC genomics 10 (1), 1-17, 2009
|Adverse outcome pathways for regulatory applications: examination of four case studies with different degrees of completeness and scientific confidence|
EJ Perkins, P Antczak, L Burgoon, F Falciani, N Garcia-Reyero, S Gutsell, ...
Toxicological Sciences 148 (1), 14-25, 2015
|Differential effects and potential adverse outcomes of ionic silver and silver nanoparticles in vivo and in vitro|
N Garcia-Reyero, AJ Kennedy, BL Escalon, T Habib, JG Laird, A Rawat, ...
Environmental science & technology 48 (8), 4546-4555, 2014
|Reverse engineering adverse outcome pathways|
EJ Perkins, JK Chipman, S Edwards, T Habib, F Falciani, R Taylor, ...
Environmental toxicology and chemistry 30 (1), 22-38, 2011
|Toxicogenomic analysis provides new insights into molecular mechanisms of the sublethal toxicity of 2, 4, 6-trinitrotoluene in Eisenia fetida|
P Gong, X Guan, LS Inouye, M Pirooznia, KJ Indest, RS Athow, Y Deng, ...
Environmental science & technology 41 (23), 8195-8202, 2007
|Gene Expression Profiling in Daphnia magna, Part II: Validation of a Copper Specific Gene Expression Signature with Effluent from Two Copper Mines in California|
HC Poynton, R Zuzow, AV Loguinov, EJ Perkins, CD Vulpe
Environmental science & technology 42 (16), 6257-6263, 2008
|Cloning, analysis and functional annotation of expressed sequence tags from the Earthworm Eisenia fetida|
M Pirooznia, P Gong, X Guan, LS Inouye, K Yang, EJ Perkins, Y Deng
BMC bioinformatics 8 (7), 1-16, 2007