Tong Liu
Tong Liu
Verified email at miami.edu - Homepage
Title
Cited by
Cited by
Year
Predicting DNA methylation state of CpG dinucleotide using genome topological features and deep networks
Y Wang, T Liu, D Xu, H Shi, C Zhang, YY Mo, Z Wang
Scientific reports 6 (1), 1-15, 2016
652016
Benchmarking deep networks for predicting residue-specific quality of individual protein models in CASP11
T Liu, Y Wang, J Eickholt, Z Wang
Scientific reports 6 (1), 1-10, 2016
342016
Epigenomic signatures underpin the axonal regenerative ability of dorsal root ganglia sensory neurons
I Palmisano, MC Danzi, TH Hutson, L Zhou, E McLachlan, E Serger, ...
Nature neuroscience 22 (11), 1913-1924, 2019
282019
HiCNN: a very deep convolutional neural network to better enhance the resolution of Hi-C data
T Liu, Z Wang
Bioinformatics 35 (21), 4222-4228, 2019
182019
scHiCNorm: a software package to eliminate systematic biases in single-cell Hi-C data
T Liu, Z Wang
Bioinformatics 34 (6), 1046-1047, 2018
112018
TADKB: Family classification and a knowledge base of topologically associating domains
T Liu, J Porter, C Zhao, H Zhu, N Wang, Z Sun, YY Mo, Z Wang
BMC genomics 20 (1), 1-17, 2019
102019
SOV_refine: a further refined definition of segment overlap score and its significance for protein structure similarity
T Liu, Z Wang
Source code for biology and medicine 13 (1), 1-10, 2018
102018
Reconstructing high-resolution chromosome three-dimensional structures by hi-C complex networks
T Liu, Z Wang
BMC bioinformatics 19 (17), 39-50, 2018
92018
Measuring the three-dimensional structural properties of topologically associating domains
T Liu, Z Wang
2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018
42018
Predicting protein residue-residue contacts using random forests and deep networks
J Luttrell, T Liu, C Zhang, Z Wang
BMC bioinformatics 20 (2), 115-127, 2019
32019
基于 Merkle 树的起源完整性解决方案
刘通, 王凤英
山东理工大学学报: 自然科学版 26 (3), 68-71, 2012
32012
normGAM: an R package to remove systematic biases in genome architecture mapping data
T Liu, Z Wang
BMC genomics 20 (12), 1-8, 2019
22019
基于 OPM 的安全起源研究
刘通
淄博: 山东理工大学, 2013
22013
Exploring the 2D and 3D structural properties of topologically associating domains
T Liu, Z Wang
BMC bioinformatics 20 (16), 1-10, 2019
12019
HiCNN2: enhancing the resolution of Hi-C data using an ensemble of convolutional neural networks
T Liu, Z Wang
Genes 10 (11), 862, 2019
12019
Computational Explorations of 3D Genome Structures
T Liu
University of Miami, 2021
2021
MASS: predict the global qualities of individual protein models using random forests and novel statistical potentials
T Liu, Z Wang
BMC bioinformatics 21 (4), 1-10, 2020
2020
基于 OPM 的安全起源模型
刘通, 王凤英
计算机应用研究 30 (10), 3117-3120, 2013
2013
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