| Correlating viral phenotypes with phylogeny: accounting for phylogenetic uncertainty J Parker, A Rambaut, OG Pybus Infection, Genetics and Evolution 8 (3), 239-246, 2008 | 417 | 2008 |
| Genome-wide signatures of convergent evolution in echolocating mammals J Parker, G Tsagkogeorga, JA Cotton, Y Liu, P Provero, E Stupka, ... Nature 502 (7470), 228-231, 2013 | 356 | 2013 |
| Phylogenomic analyses elucidate the evolutionary relationships of bats G Tsagkogeorga, J Parker, E Stupka, JA Cotton, SJ Rossiter Current Biology 23 (22), 2262-2267, 2013 | 143 | 2013 |
| The mode and tempo of hepatitis C virus evolution within and among hosts RR Gray, J Parker, P Lemey, M Salemi, A Katzourakis, OG Pybus BMC evolutionary biology 11 (1), 1-10, 2011 | 142 | 2011 |
| Field-based species identification of closely-related plants using real-time nanopore sequencing J Parker, AJ Helmstetter, D Devey, T Wilkinson, AST Papadopulos Scientific reports 7 (1), 1-8, 2017 | 70 | 2017 |
| Evolutionary and phylogenetic analysis of the hepaciviruses and pegiviruses J Thézé, S Lowes, J Parker, OG Pybus Genome Biology and Evolution 7 (11), 2996-3008, 2015 | 63 | 2015 |
| Molecular epidemiology and phylogeny reveals complex spatial dynamics of endemic canine parvovirus SR Clegg, KP Coyne, J Parker, S Dawson, SA Godsall, G Pinchbeck, ... Journal of virology, JVI. 01576-10v1, 2011 | 51* | 2011 |
| Full-length characterization of hepatitis C virus subtype 3a reveals novel hypervariable regions under positive selection during acute infection I Humphreys, V Fleming, P Fabris, J Parker, B Schulenberg, A Brown, ... Journal of virology 83 (22), 11456-11466, 2009 | 36 | 2009 |
| Safety and immunogenicity of novel recombinant BCG and modified vaccinia virus Ankara vaccines in neonate rhesus macaques M Rosario, J Fulkerson, S Soneji, J Parker, EJ Im, N Borthwick, ... Journal of virology 84 (15), 7815-7821, 2010 | 33 | 2010 |
| Estimating the date of origin of an HIV-1 circulating recombinant form KK Tee, OG Pybus, J Parker, KP Ng, A Kamarulzaman, Y Takebe Virology 387 (1), 229-234, 2009 | 32 | 2009 |
| Diagnostic accuracy of loop-mediated isothermal amplification coupled to nanopore sequencing (LamPORE) for the detection of SARS-CoV-2 infection at scale in symptomatic and … A Ptasinska, C Whalley, A Bosworth, C Poxon, C Bryer, N Machin, ... Clinical microbiology and infection 27 (9), 1348. e1-1348. e7, 2021 | 19 | 2021 |
| Generation of neutralizing antibodies and divergence of SIVmac239 in cynomolgus macaques following short-term early antiretroviral therapy G Özkaya Şahin, EJ Bowles, J Parker, H Uchtenhagen, E Sheik-Khalil, ... PLoS pathogens 6 (9), e1001084, 2010 | 15 | 2010 |
| Selected HIV-1 Env trimeric formulations act as potent immunogens in a rabbit vaccination model L Heyndrickx, G Stewart-Jones, M Jansson, H Schuitemaker, E Bowles, ... PloS one 8 (9), e74552, 2013 | 14 | 2013 |
| Speciation processes in putative island endemic sister bat species: false impressions from mitochondrial DNA and microsatellite data HC Kuo, SF Chen, YP Fang, JA Cotton, JD Parker, G Csorba, BK Lim, ... Molecular Ecology 24 (23), 5910-5926, 2015 | 13 | 2015 |
| A framework for predicting soft-fruit yields and phenology using embedded, networked microsensors, coupled weather models and machine-learning techniques MA Lee, A Monteiro, A Barclay, J Marcar, M Miteva-Neagu, J Parker Computers and Electronics in Agriculture 168, 105103, 2020 | 12 | 2020 |
| Rapid parallel adaptation to anthropogenic heavy metal pollution AST Papadopulos, AJ Helmstetter, OG Osborne, AA Comeault, DP Wood, ... Molecular biology and evolution 38 (9), 3724-3736, 2021 | 8 | 2021 |
| RT-LAMP has high accuracy for detecting SARS-CoV-2 in saliva and naso/oropharyngeal swabs from asymptomatic and symptomatic individuals SP Kidd, D Burns, B Armson, AD Beggs, ELA Howson, A Williams, G Snell, ... medRxiv, 2021.06. 28.21259398, 2022 | 6 | 2022 |
| Rapid, raw-read reference and identification (R4IDs): A flexible platform for rapid generic species ID using long-read sequencing technology J Parker, A Helmstetter, J Crowe, J Iacona, D Devey, AST Papadopulos bioRxiv, 281048, 2018 | 2 | 2018 |
| Reverse-Transcription Loop-Mediated Isothermal Amplification Has High Accuracy for Detecting Severe Acute Respiratory Syndrome Coronavirus 2 in Saliva and Nasopharyngeal … SP Kidd, D Burns, B Armson, AD Beggs, ELA Howson, A Williams, G Snell, ... The Journal of Molecular Diagnostics 24 (4), 320-336, 2022 | 1 | 2022 |
| Lightweight bioinformatics: evaluating the utility of Single Board Computer (SBC) clusters for portable, scalable Real-Time Bioinformatics in fieldwork environments via … J Parker bioRxiv, 337212, 2018 | 1 | 2018 |
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
