Michael E. Alfaro
Michael E. Alfaro
Verified email at ucla.edu - Homepage
TitleCited byYear
Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence
ME Alfaro, S Zoller, F Lutzoni
Molecular Biology and Evolution 20 (2), 255-266, 2003
9372003
Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates
ME Alfaro, F Santini, C Brock, H Alamillo, A Dornburg, DL Rabosky, ...
Proceedings of the National Academy of Sciences 106 (32), 13410-13414, 2009
6922009
Bayesian phylogenetic model selection using reversible jump Markov chain Monte Carlo
JP Huelsenbeck, B Larget, ME Alfaro
Molecular biology and evolution 21 (6), 1123-1133, 2004
4152004
Rates of speciation and morphological evolution are correlated across the largest vertebrate radiation
DL Rabosky, F Santini, J Eastman, SA Smith, B Sidlauskas, J Chang, ...
Nature communications 4, 1958, 2013
3902013
Many-to-one mapping of form to function: a general principle in organismal design?
PC Wainwright, ME Alfaro, DI Bolnick, CD Hulsey
Integrative and comparative biology 45 (2), 256-262, 2005
2792005
Did genome duplication drive the origin of teleosts? A comparative study of diversification in ray-finned fishes
F Santini, LJ Harmon, G Carnevale, ME Alfaro
BMC evolutionary biology 9 (1), 194, 2009
2732009
Phylogenetic relationships and evolutionary history of the reef fish family Labridae
MW Westneat, ME Alfaro
Molecular phylogenetics and evolution 36 (2), 370-390, 2005
2732005
Evolutionary history of the parrotfishes: biogeography, ecomorphology, and comparative diversity
JT Streelman, M Alfaro, MW Westneat, DR Bellwood, SA Karl
Evolution 56 (5), 961-971, 2002
2692002
Integrating fossils with molecular phylogenies improves inference of trait evolution
GJ Slater, LJ Harmon, ME Alfaro
Evolution: International Journal of Organic Evolution 66 (12), 3931-3944, 2012
2272012
Diversity versus disparity and the radiation of modern cetaceans
GJ Slater, SA Price, F Santini, ME Alfaro
Proceedings of the Royal Society B: Biological Sciences 277 (1697), 3097-3104, 2010
2222010
Explosive Pleistocene range expansion leads to widespread Amazonian sympatry between robust and gracile capuchin monkeys
JW Lynch Alfaro, JP Boubli, LE Olson, A Di Fiore, B Wilson, ...
Journal of Biogeography 39 (2), 272-288, 2012
2052012
A novel comparative method for identifying shifts in the rate of character evolution on trees
JM Eastman, ME Alfaro, P Joyce, AL Hipp, LJ Harmon
Evolution: International Journal of Organic Evolution 65 (12), 3578-3589, 2011
1892011
geiger v2. 0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees
MW Pennell, JM Eastman, GJ Slater, JW Brown, JC Uyeda, RG FitzJohn, ...
Bioinformatics 30 (15), 2216-2218, 2014
1862014
A phylogenomic perspective on the radiation of ray-finned fishes based upon targeted sequencing of ultraconserved elements (UCEs)
BC Faircloth, L Sorenson, F Santini, ME Alfaro
PLoS One 8 (6), e65923, 2013
1812013
Do reefs drive diversification in marine teleosts? Evidence from the pufferfish and their allies (Order Tetraodontiformes)
ME Alfaro, F Santini, CD Brock
Evolution: International Journal of Organic Evolution 61 (9), 2104-2126, 2007
1792007
Evolutionary consequences of many-to-one mapping of jaw morphology to mechanics in labrid fishes
ME Alfaro, DI Bolnick, PC Wainwright
The American Naturalist 165 (6), E140-E154, 2005
1742005
Clade age and species richness are decoupled across the eukaryotic tree of life
DL Rabosky, GJ Slater, ME Alfaro
PLoS biology 10 (8), e1001381, 2012
1712012
The posterior and the prior in Bayesian phylogenetics
ME Alfaro, MT Holder
Annu. Rev. Ecol. Evol. Syst. 37, 19-42, 2006
1672006
Evolutionary dynamics of complex biomechanical systems: an example using the four‐bar mechanism
ME Alfaro, DI Bolnick, PC Wainwright
Evolution 58 (3), 495-503, 2004
1412004
Iterative ecological radiation and convergence during the evolutionary history of damselfishes (Pomacentridae)
B Frédérich, L Sorenson, F Santini, GJ Slater, ME Alfaro
The American Naturalist 181 (1), 94-113, 2012
1332012
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Articles 1–20