Brian John Parker
Brian John Parker
Assistant Professor in Computational Biology, New York University
Verified email at nyu.edu
TitleCited byYear
A high-resolution map of human evolutionary constraint using 29 mammals
K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ...
Nature 478 (7370), 476, 2011
8342011
Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA
JE Squires, HR Patel, M Nousch, T Sibbritt, DT Humphreys, BJ Parker, ...
Nucleic acids research 40 (11), 5023-5033, 2012
4452012
Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality
DF Simola, L Wissler, G Donahue, RM Waterhouse, M Helmkampf, ...
Genome research 23 (8), 1235-1247, 2013
1812013
Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome
JS Pedersen, E Valen, AMV Velazquez, BJ Parker, M Rasmussen, ...
Genome research 24 (3), 454-466, 2014
992014
New families of human regulatory RNA structures identified by comparative analysis of vertebrate genomes
BJ Parker, I Moltke, A Roth, S Washietl, J Wen, M Kellis, R Breaker, ...
Genome research 21 (11), 1929-1943, 2011
872011
Histone H2A. Z inheritance during the cell cycle and its impact on promoter organization and dynamics
M Nekrasov, J Amrichova, BJ Parker, TA Soboleva, C Jack, R Williams, ...
Nature structural & molecular biology 19 (11), 1076, 2012
862012
Locating protein-coding sequences under selection for additional, overlapping functions in 29 mammalian genomes
MF Lin, P Kheradpour, S Washietl, BJ Parker, JS Pedersen, M Kellis
Genome research 21 (11), 1916-1928, 2011
742011
In Silico identification and characterization of mRNA-like noncoding transcripts in Medicago truncatula
J Wen, BJ Parker, GF Weiller
In silico biology 7 (4, 5), 485-505, 2007
702007
MicroRNA transfection and AGO-bound CLIP-seq data sets reveal distinct determinants of miRNA action
J Wen, BJ Parker, A Jacobsen, A Krogh
Rna 17 (5), 820-834, 2011
682011
Stratification bias in low signal microarray studies
BJ Parker, S GŁnter, J Bedo
BMC bioinformatics 8 (1), 326, 2007
592007
Graph-based Mumford-Shah segmentation of dynamic PET with application to input function estimation
BJ Parker, D Feng
IEEE Transactions on Nuclear Science 52 (1), 79-89, 2005
482005
Systematic clustering of transcription start site landscapes
X Zhao, E Valen, BJ Parker, A Sandelin
PloS one 6 (8), e23409, 2011
472011
Transcriptome-wide mapping of RNA 5-methylcytosine in Arabidopsis mRNAs and noncoding RNAs
R David, A Burgess, B Parker, J Li, K Pulsford, T Sibbritt, T Preiss, ...
The Plant Cell 29 (3), 445-460, 2017
452017
Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data
Y Chen, M JÝrgensen, R Kolde, X Zhao, B Parker, E Valen, J Wen, ...
BMC genomics 12 (1), 544, 2011
302011
Temporal Processing of dynamic positron emission tomography via principal component analysis in the sinogram domain
Z Chen, BJ Parker, DD Feng, R Fulton
IEEE Transactions on Nuclear Science 51 (5), 2612-2619, 2004
212004
MiR‐492 impairs the angiogenic potential of endothelial cells
F Patella, E Leucci, M Evangelista, B Parker, J Wen, A Mercatanti, ...
Journal of cellular and molecular medicine 17 (8), 1006-1015, 2013
182013
Molecular pathways involved in the improvement of non-alcoholic fatty liver disease
G Paz-Filho, CA Mastronardi, BJ Parker, A Khan, A Inserra, KI Matthaei, ...
J Mol Endocrinol 51 (1), 167-179, 2013
172013
Predicting microRNA targets in time-series microarray experiments via functional data analysis
BJ Parker, J Wen
BMC bioinformatics 10 (1), S32, 2009
152009
A new link between transcriptional initiation and pre-mRNA splicing: The RNA binding histone variant H2A. B
TA Soboleva, BJ Parker, M Nekrasov, G Hart-Smith, YJ Tay, WQ Tng, ...
PLoS genetics 13 (2), e1006633, 2017
132017
Method for automatic segmentation of image data from multiple data sources
JFA Magarey, BJ Parker
US Patent 6,947,590, 2005
122005
The system can't perform the operation now. Try again later.
Articles 1–20