| RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond S Gama-Castro, H Salgado, A Santos-Zavaleta, D Ledezma-Tejeida, ... Nucleic acids research 44 (D1), D133-D143, 2016 | 378 | 2016 |
| BioC: A minimalist approach to interoperability for biomedical text processing DC Comeau, RI Doğan, P Ciccarese, KB Cohen, M Krallinger, F Leitner, ... Database 2013, bat064, 2013 | 158 | 2013 |
| The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-Aryamontri, ... BMC bioinformatics 12 (S8), S3, 2011 | 158 | 2011 |
| The gene normalization task in BioCreative III Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, RTH Tsai, ... BMC bioinformatics 12 (S8), S2, 2011 | 148 | 2011 |
| FACILE: Description of the NE System Used for MUC-7 WJ Black, F Rinaldi, D Mowatt Proceedings of the 7th Message Understanding Conference, 1998 | 130 | 1998 |
| The generalized upper model 2.0 JA Bateman, R Henschel, F Rinaldi Proceedings of the ECAI94 Workshop: Comparison of Implemented Ontologies, 1995 | 128 | 1995 |
| Mining of relations between proteins over biomedical scientific literature using a deep-linguistic approach F Rinaldi, G Schneider, K Kaljurand, M Hess, C Andronis, O Konstandi, ... Artificial intelligence in medicine 39 (2), 127-136, 2007 | 97 | 2007 |
| Exploiting paraphrases in a question answering system F Rinaldi, J Dowdall, K Kaljurand, M Hess, D Mollá Proceedings of the second international workshop on Paraphrasing-Volume 16 …, 2003 | 95 | 2003 |
| BioCreative III interactive task: an overview CN Arighi, PM Roberts, S Agarwal, S Bhattacharya, G Cesareni, ... BMC bioinformatics 12 (S8), S4, 2011 | 93 | 2011 |
| OntoGene in BioCreative II. 5 F Rinaldi, G Schneider, K Kaljurand, S Clematide, T Vachon, M Romacker IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB) 7 …, 2010 | 88 | 2010 |
| The generalized italian, german, english upper model J Bateman, B Magnini, F Rinaldi, R Henschel | 86 | 1994 |
| OntoGene in BioCreative II F Rinaldi, T Kappeler, K Kaljurand, G Schneider, M Klenner, S Clematide, ... Genome Biology 9 (Suppl 2), S13, 2008 | 81 | 2008 |
| An environment for relation mining over richly annotated corpora: the case of GENIA F Rinaldi, G Schneider, K Kaljurand, M Hess, M Romacker BMC bioinformatics 7 (S3), S3, 2006 | 75 | 2006 |
| Mining relations in the GENIA corpus F Rinaldi, G Schneider, K Kaljurand, J Dowdall, C Andronis, A Persidis, ... Proceedings of the Second European Workshop on Data Mining and Text Mining …, 2004 | 67 | 2004 |
| Assessment of NER solutions against the first and second CALBC Silver Standard Corpus D Rebholz-Schuhmann, AJ Yepes, C Li, S Kafkas, I Lewin, N Kang, ... Journal of Biomedical Semantics 2 (5), 1-12, 2011 | 62 | 2011 |
| Answering questions in the genomics domain F Rinaldi, J Dowdall, G Schneider, A Persidis Proceedings of the ACL 2004 Workshop on Question Answering in Restricted …, 2004 | 60 | 2004 |
| Attempto controlled english: A knowledge representation language readable by humans and machines NE Fuchs, S Höfler, K Kaljurand, F Rinaldi, G Schneider Reasoning Web, 213-250, 2005 | 49 | 2005 |
| Facile: Classifying texts integrating pattern matching and information extraction F Ciravegna, A Lavelli, N Mana, J Matiasek, L Gilardoni, S Mazza, ... INTERNATIONAL JOINT CONFERENCE ON ARTIFICIAL INTELLIGENCE 16, 890-897, 1999 | 43 | 1999 |
| A symbolic approach to automatic multiword term structuring E SanJuan, J Dowdall, F Ibekwe-SanJuan, F Rinaldi Computer Speech & Language 19 (4), 524-542, 2005 | 39 | 2005 |
| Multilayer annotations in Parmenides F Rinaldi, J Dowdall, M Hess, J Ellman, GP Zarri, A Persidis, L Bernard, ... The K-CAP2003 workshop on “Knowledge Markup and Semantic Annotation, 33-40, 2003 | 38 | 2003 |
Kaarel KaljurandNuance CommunicationsVerified email at nuance.com
