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Dr. Sebastian Menke
Dr. Sebastian Menke
Head of clinical NLP
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Cited by
Year
Clinical characteristics and prognostic factors for intensive care unit admission of patients with COVID-19: retrospective study using machine learning and natural language …
JL Izquierdo, J Ancochea, Savana COVID-19 Research Group, ...
Journal of medical Internet research 22 (10), e21801, 2020
1252020
Plant–frugivore networks are less specialized and more robust at forest–farmland edges than in the interior of a tropical forest
S Menke, K Böhning‐Gaese, M Schleuning
Oikos 121 (10), 1553-1566, 2012
1142012
Earthworms and cadmium–heavy metal resistant gut bacteria as indicators for heavy metal pollution in soils?
M Šrut, S Menke, M Höckner, S Sommer
Ecotoxicology and environmental safety 171, 843-853, 2019
952019
Gut microbiomes of free‐ranging and captive Namibian cheetahs: diversity, putative functions, and occurrence of potential pathogens
Wasimuddin, S Menke, J Melzheimer, S Thalwitzer, S Heinrich, B Wachter, ...
Molecular ecology, 2017
882017
Home-made cost effective preservation buffer is a better alternative to commercial preservation methods for microbiome research
S Menke, MAF Gillingham, K Wilhelm, S Sommer
Frontiers in microbiology 8, 232336, 2017
822017
Oligotyping reveals differences between gut microbiomes of free-ranging sympatric Namibian carnivores (Acinonyx jubatus, Canis mesomelas) on a bacterial species-like level
S Menke, Wasimuddin, M Meier, J Melzheimer, JKE Mfune, S Heinrich, ...
Frontiers in microbiology 5, 526, 2014
492014
Assessing the performance of clinical natural language processing systems: development of an evaluation methodology
L Canales, S Menke, S Marchesseau, A D’Agostino, C del Rio-Bermudez, ...
JMIR Medical Informatics 9 (7), e20492, 2021
412021
Shifts in the gut microbiome observed in wildlife faecal samples exposed to natural weather conditions: Lessons from time‐series analyses using next‐generation sequencing for …
S Menke, M Meier, S Sommer
Methods in Ecology and Evolution 6 (9), 1080-1087, 2015
382015
Offspring microbiomes differ across breeding sites in a panmictic species
MAF Gillingham, A Béchet, F Cézilly, K Wilhelm, M Rendón-Martos, ...
Frontiers in Microbiology 10, 35, 2019
362019
Effects of host traits and land-use changes on the gut microbiota of the Namibian black-backed jackal (Canis mesomelas)
S Menke, M Meier, JKE Mfune, J Melzheimer, B Wachter, S Sommer
FEMS Microbiology Ecology 93 (11), fix123, 2017
312017
Impact of winter enclosures on the gut bacterial microbiota of red deer in the Bavarian Forest National Park
S Menke, M Heurich, M Henrich, K Wilhelm, S Sommer
Wildlife Biology 1 (doi: 10.2981/wlb.00503), 2019
242019
Phylogeny-and abundance-based metrics allow for the consistent comparison of core gut microbiome diversity indices across host species
A Risely, MAF Gillingham, A Béchet, S Brändel, AC Heni, M Heurich, ...
Frontiers in Microbiology 12, 659918, 2021
212021
Clinical characteristics and prognostic factors for ICU admission of patients with COVID-19 using machine learning and natural language processing
JL Izquierdo, J Ancochea, Savana COVID-19 Research Group, ...
medRxiv, 2020.05. 22.20109959, 2020
102020
Evaluation of Natural Language Processing for the Identification of Crohn Disease–Related Variables in Spanish Electronic Health Records: A Validation Study for the PREMONITION …
C Montoto, JP Gisbert, I Guerra, R Plaza, R Pajares Villarroya, ...
JMIR Medical Informatics 10 (2), e30345, 2022
72022
Symptoms timeline and outcomes in amyotrophic lateral sclerosis using artificial intelligence
T Segura, IH Medrano, S Collazo, C Maté, C Sguera, ...
Scientific Reports 13 (1), 702, 2023
42023
Major Adverse Cardiovascular Events in Coronary Type 2 Diabetic Patients: Identification of Associated Factors Using Electronic Health Records and Natural Language Processing
C González-Juanatey, M Anguita-Sánchez, V Barrios, I Núñez-Gil, ...
Journal of clinical medicine 11 (20), 6004, 2022
32022
Negation recognition in clinical natural language processing using a combination of the NegEx algorithm and a convolutional neural network
G Argüello-González, J Aquino-Esperanza, D Salvador, R Bretón-Romero, ...
BMC Medical Informatics and Decision Making 23 (1), 216, 2023
12023
Metagenomic analysis of coprolites from three Late Pleistocene megaherbivores from the southwestern United States
TO Prys-Jones, TN Furstenau, AJ Abraham, IN Shaffer, CJ Sobek, ...
BioRxiv, 2022.05. 06.490351, 2022
12022
Clinical characteristics and prognostic factors for icu admission of patientswith covid-19: a retrospective study using machine learning and natural language processing
JL Izquierdo Alonso, J Ancochea Bermúdez, I Hernández Medrano, ...
12020
Clinical characteristics and management of patients with secondary hyperparathyroidism undergoing hemodialysis: a feasibility analysis of electronic health records using …
A Ortiz, J Portoles, MD Pino-Pino, J Barea, M López, P de Sequera, ...
Kidney Diseases 9 (3), 187-196, 2023
2023
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