| Coexpression analysis of human genes across many microarray data sets HK Lee, AK Hsu, J Sajdak, J Qin, P Pavlidis Genome research 14 (6), 1085-1094, 2004 | 850 | 2004 |
| Molecular and functional heterogeneity of hyperpolarization-activated pacemaker channels in the mouse CNS B Santoro, S Chen, A Lüthi, P Pavlidis, GP Shumyatsky, GR Tibbs, ... Journal of Neuroscience 20 (14), 5264-5275, 2000 | 621 | 2000 |
| Altered brain microRNA biogenesis contributes to phenotypic deficits in a 22q11-deletion mouse model KL Stark, B Xu, A Bagchi, WS Lai, H Liu, R Hsu, X Wan, P Pavlidis, ... Nature genetics 40 (6), 751-760, 2008 | 549 | 2008 |
| Zac1 regulates an imprinted gene network critically involved in the control of embryonic growth A Varrault, C Gueydan, A Delalbre, A Bellmann, S Houssami, C Aknin, ... Developmental cell 11 (5), 711-722, 2006 | 453 | 2006 |
| Gene functional classification from heterogeneous data P Pavlidis, J Weston, J Cai, WN Grundy Proceedings of the fifth annual international conference on Computational …, 2001 | 387 | 2001 |
| Matrix2png: a utility for visualizing matrix data P Pavlidis, WS Noble Bioinformatics 19 (2), 295-296, 2003 | 378 | 2003 |
| De novo mutations in schizophrenia implicate chromatin remodeling and support a genetic overlap with autism and intellectual disability SE McCarthy, J Gillis, M Kramer, J Lihm, S Yoon, Y Berstein, M Mistry, ... Molecular psychiatry 19 (6), 652-658, 2014 | 326 | 2014 |
| Learning gene functional classifications from multiple data types P Pavlidis, J Weston, J Cai, WS Noble Journal of computational biology 9 (2), 401-411, 2002 | 306 | 2002 |
| ErmineJ: tool for functional analysis of gene expression data sets H Lee, W Braynen, K Keshav, P Pavlidis BMC bioinformatics 6 (1), 269, 2005 | 304 | 2005 |
| Analysis of strain and regional variation in gene expression in mouse brain P Pavlidis, WS Noble Genome Biol 2 (10), 0042, 2001 | 302 | 2001 |
| Experimental comparison and cross-validation of the Affymetrix and Illumina gene expression analysis platforms M Barnes, J Freudenberg, S Thompson, B Aronow, P Pavlidis Nucleic acids research 33 (18), 5914, 2005 | 283 | 2005 |
| Inducible enhancement of memory storage and synaptic plasticity in transgenic mice expressing an inhibitor of ATF4 (CREB-2) and C/EBP proteins A Chen, IA Muzzio, G Malleret, D Bartsch, M Verbitsky, P Pavlidis, ... Neuron 39 (4), 655-669, 2003 | 267 | 2003 |
| An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17 (1), 1-19, 2016 | 265 | 2016 |
| Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy A Muchir, P Pavlidis, V Decostre, AJ Herron, T Arimura, G Bonne, ... Journal of Clinical Investigation 117 (5), 1282, 2007 | 264 | 2007 |
| Using the gene ontology for microarray data mining: a comparison of methods and application to age effects in human prefrontal cortex P Pavlidis, J Qin, V Arango, JJ Mann, E Sibille Neurochemical research 29 (6), 1213-1222, 2004 | 264 | 2004 |
| Transcriptional and behavioral interaction between 22q11. 2 orthologs modulates schizophrenia-related phenotypes in mice M Paterlini, SS Zakharenko, WS Lai, J Qin, H Zhang, J Mukai, ... Nature neuroscience 8 (11), 1586-1594, 2005 | 254 | 2005 |
| Hierarchical model of gene regulation by transforming growth factor β YC Yang, E Piek, J Zavadil, D Liang, D Xie, J Heyer, P Pavlidis, ... Proceedings of the National Academy of Sciences 100 (18), 10269-10274, 2003 | 251 | 2003 |
| Classification and subtype prediction of adult soft tissue sarcoma by functional genomics NH Segal, P Pavlidis, CR Antonescu, RG Maki, WS Noble, D DeSantis, ... The American journal of pathology 163 (2), 691, 2003 | 227 | 2003 |
| Molecular aging in human prefrontal cortex is selective and continuous throughout adult life L Erraji-Benchekroun, MD Underwood, V Arango, H Galfalvy, P Pavlidis, ... Biological psychiatry 57 (5), 549-558, 2005 | 222 | 2005 |
| Gene ontology term overlap as a measure of gene functional similarity M Mistry, P Pavlidis BMC bioinformatics 9 (1), 327, 2008 | 214 | 2008 |
Jesse GillisAssociate Professor of Computational Genomics, Cold Spring Harbor LaboratoryVerified email at cshl.edu
