proovread : large-scale high-accuracy PacBio correction through iterative short read consensus T Hackl, R Hedrich, J Schultz, F Förster Bioinformatics 30 (21), 3004-3011, 2014 | 322 | 2014 |
ITS2 database IV: interactive taxon sampling for internal transcribed spacer 2 based phylogenies C Koetschan, T Hackl, T Müller, M Wolf, F Förster, J Schultz Molecular Phylogenetics and Evolution 63 (3), 585-588, 2012 | 130 | 2012 |
Metagenomic binning of a marine sponge microbiome reveals unity in defense but metabolic specialization BM Slaby, T Hackl, H Horn, K Bayer, U Hentschel The ISME journal 11 (11), 2465-2478, 2017 | 77 | 2017 |
Host genome integration and giant virus-induced reactivation of the virophage mavirus MG Fischer, T Hackl Nature 540 (7632), 288-291, 2016 | 71 | 2016 |
The ITS2 database B Merget, C Koetschan, T Hackl, F Förster, T Dandekar, T Müller, ... JoVE (Journal of Visualized Experiments), e3806, 2012 | 53 | 2012 |
Marine microbial metagenomes sampled across space and time SJ Biller, PM Berube, K Dooley, M Williams, BM Satinsky, T Hackl, ... Scientific data 5 (1), 1-7, 2018 | 47 | 2018 |
Single cell genomes of Prochlorococcus, Synechococcus, and sympatric microbes from diverse marine environments PM Berube, SJ Biller, T Hackl, SL Hogle, BM Satinsky, JW Becker, ... Scientific data 5 (1), 1-11, 2018 | 33 | 2018 |
AliTV—interactive visualization of whole genome comparisons MJ Ankenbrand, S Hohlfeld, T Hackl, F Förster PeerJ Computer Science 3, e116, 2017 | 31 | 2017 |
Genomes of the Venus flytrap and close relatives unveil the roots of plant carnivory G Palfalvi, T Hackl, N Terhoeven, TF Shibata, T Nishiyama, ... Current biology 30 (12), 2312-2320. e5, 2020 | 11 | 2020 |
chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data MJ Ankenbrand, S Pfaff, N Terhoeven, M Qureischi, M Gündel, CL Weiß, ... The Journal of Open Source Software 3 (21), 464, 2018 | 11 | 2018 |
Improving draft genome contiguity with reference-derived in silico mate-pair libraries JH Grau, T Hackl, KP Koepfli, M Hofreiter GigaScience 7 (5), giy029, 2018 | 8 | 2018 |
Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis T Hackl, R Martin, K Barenhoff, S Duponchel, D Heider, MG Fischer Scientific data 7 (1), 1-9, 2020 | 7 | 2020 |
Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate R Massana, A Labarre, D López-Escardó, A Obiol, F Bucchini, T Hackl, ... The ISME Journal, 1-14, 2020 | 3 | 2020 |
reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome N Terhoeven, J Schultz, T Hackl Journal of Open Source Software, 2018 | 2 | 2018 |
A draft genome for the Venus flytrap, Dionaea muscipula: Evaluation of assembly strategies for a complex Genome–Development of novel approaches and bioinformatics solutions T Hackl | 1 | 2016 |
MOSGA: Modular Open-Source Genome Annotator R Martin, T Hackl, G Hattab, MG Fischer, D Heider arXiv preprint arXiv:2009.03758, 2020 | | 2020 |
Novel integrative elements and genomic plasticity in ocean ecosystems T Hackl, R Laurenceau, MJ Ankenbrand, C Bliem, Z Cariani, E Thomas, ... bioRxiv, 2020 | | 2020 |
Endogenous virophages populate the genomes of a marine heterotrophic flagellate T Hackl, S Duponchel, K Barenhoff, A Weinmann, MG Fischer bioRxiv, 2020 | | 2020 |
Phosphonate production by marine microbes: exploring new sources and potential function M Acker, SL Hogle, PM Berube, T Hackl, RM Stepanauskas, ... bioRxiv, 2020 | | 2020 |
Rapid in vitro prototyping of O-methyltransferases for pathway applications in Escherichia coli K Haslinger, T Hackl, KL Prather bioRxiv, 2020 | | 2020 |