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Duncan Ralph
Duncan Ralph
Verified email at fredhutch.org
Title
Cited by
Cited by
Year
Combined results of searches for the standard model Higgs boson in pp collisions at s= 7 TeV
S Chatrchyan, V Khachatryan, AM Sirunyan, A Tumasyan, W Adam, ...
Physics Letters B 710 (1), 26-48, 2012
12482012
Measurement of the properties of a Higgs boson in the four-lepton final state
S Chatrchyan, V Khachatryan, AM Sirunyan, A Tumasyan, W Adam, ...
Physical Review D 89 (9), 092007, 2014
11412014
Evidence for the 125 GeV Higgs boson decaying to a pair of τ leptons
S Chatrchyan, V Khachatryan, AM Sirunyan, A Tumasyan, W Adam, ...
Journal of High Energy Physics 2014 (5), 1-72, 2014
8112014
Consistency of VDJ rearrangement and substitution parameters enables accurate B cell receptor sequence annotation
DK Ralph, FA Matsen IV
PLoS computational biology 12 (1), e1004409, 2016
107*2016
Likelihood-based inference of B cell clonal families
DK Ralph, FA Matsen IV
PLoS computational biology 12 (10), e1005086, 2016
692016
Inferred allelic variants of immunoglobulin receptor genes: a system for their evaluation, documentation, and naming
M Ohlin, C Scheepers, M Corcoran, WD Lees, CE Busse, D Bagnara, ...
Frontiers in immunology, 435, 2019
482019
Per-sample immunoglobulin germline inference from B cell receptor deep sequencing data
DK Ralph, FA Matsen IV
PLoS computational biology 15 (7), e1007133, 2019
452019
AIRR community standardized representations for annotated immune repertoires
JA Vander Heiden, S Marquez, N Marthandan, SAC Bukhari, CE Busse, ...
Frontiers in immunology 9, 2206, 2018
372018
Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage
CA Simonich, L Doepker, D Ralph, JA Williams, A Dhar, Z Yaffe, L Gentles, ...
Nature Communications 10 (1), 1-12, 2019
232019
sumrep: A Summary Statistic Framework for Immune Receptor Repertoire Comparison and Model Validation
BJ Olson, P Moghimi, CA Schramm, A Obraztsova, D Ralph, ...
Frontiers in immunology 10, 2533, 2019
162019
A Bayesian phylogenetic hidden Markov model for B cell receptor sequence analysis
A Dhar, DK Ralph, VN Minin, FA Matsen IV
PLoS computational biology 16 (8), e1008030, 2020
132020
Diversity and function of maternal HIV-1-specific antibodies at the time of vertical transmission
LE Doepker, CA Simonich, D Ralph, MM Shipley, M Garrett, T Gobillot, ...
Journal of virology 94 (9), e01594-19, 2020
72020
Using B cell receptor lineage structures to predict affinity
DK Ralph, FA Matsen IV
PLoS computational biology 16 (11), e1008391, 2020
52020
Development of antibody-dependent cell cytotoxicity function in HIV-1 antibodies
LE Doepker, S Danon, E Harkins, DK Ralph, Z Yaffe, ME Garrett, A Dhar, ...
Elife 10, e63444, 2021
42021
Functional development of a V3/glycan-specific broadly neutralizing antibody isolated from a case of HIV superinfection
MM Shipley, VM Prasad, LE Doepker, A Dingens, DK Ralph, E Harkins, ...
Elife 10, e68110, 2021
12021
Rapid development of an infant-derived HIV-1 broadly neutralizing antibody lineage
CA Simonich, L Doepker, D Ralph, JA Williams, A Dhar, Z Yaffe, L Gentles, ...
bioRxiv, 416032, 2018
12018
Inference of B cell clonal families using heavy/light chain pairing information
DK Ralph, FA Matsen
bioRxiv, 2022
2022
Exact identity for nonlinear wave propagation
D Ralph, O Narayan, R Montgomery
Physical Review E 77 (5), 056219, 2008
2008
OGRDB–a reference database of inferred immune receptor genes
A Buntzman, A Eugster, CTU Dresden, B Corrie, C Tipton, C Joyce, ...
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