Saravanaraj Ayyampalayam
Saravanaraj Ayyampalayam
Bioinformatics Principal, HPC Facilitator
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Cited by
Cited by
Ancestral polyploidy in seed plants and angiosperms
Y Jiao, NJ Wickett, S Ayyampalayam, AS Chanderbali, L Landherr, ...
Nature 473 (7345), 97-100, 2011
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
A D’hont, F Denoeud, JM Aury, FC Baurens, F Carreel, O Garsmeur, ...
Nature 488 (7410), 213-217, 2012
Phylotranscriptomic analysis of the origin and early diversification of land plants
NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ...
Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014
Data access for the 1,000 Plants (1KP) project
N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ...
Gigascience 3 (1), 2047-217X-3-17, 2014
One thousand plant transcriptomes and the phylogenomics of green plants
JH Leebens-Mack, MS Barker, EJ Carpenter, MK Deyholos, ...
The Amborella genome and the evolution of flowering plants
VA Albert, WB Barbazuk, CW Depamphilis, JP Der, J Leebens-Mack, ...
Science 342 (6165), 1241089, 2013
A genome triplication associated with early diversification of the core eudicots
Y Jiao, J Leebens-Mack, S Ayyampalayam, JE Bowers, MR McKain, ...
Genome biology 13 (1), 1-14, 2012
The asparagus genome sheds light on the origin and evolution of a young Y chromosome
A Harkess, J Zhou, C Xu, JE Bowers, R Van der Hulst, S Ayyampalayam, ...
Nature communications 8 (1), 1-10, 2017
A phylogenomic assessment of ancient polyploidy and genome evolution across the Poales
MR McKain, H Tang, JR McNeal, S Ayyampalayam, JI Davis, ...
Genome biology and evolution 8 (4), 1150-1164, 2016
Phylogenomic analysis of transcriptome data elucidates co‐occurrence of a paleopolyploid event and the origin of bimodal karyotypes in Agavoideae (Asparagaceae)
MR McKain, N Wickett, Y Zhang, S Ayyampalayam, WR McCombie, ...
American journal of botany 99 (2), 397-406, 2012
In silico prediction of ionization constants of drugs
PH Lee, SN Ayyampalayam, LA Carreira, M Shalaeva, S Bhattachar, ...
Molecular pharmaceutics 4 (4), 498-512, 2007
Access to RNA-sequencing data from 1,173 plant species: The 1000 Plant transcriptomes initiative (1KP)
EJ Carpenter, N Matasci, S Ayyampalayam, S Wu, J Sun, J Yu, ...
GigaScience 8 (10), giz126, 2019
Air− liquid partition coefficient for a diverse set of organic compounds: Henry’s law constant in water and hexadecane
SH Hilal, SN Ayyampalayam, LA Carreira
Environmental science & technology 42 (24), 9231-9236, 2008
Calculating physical properties of organic compounds for environmental modeling from molecular structure
SH Hilal, AN Saravanaraj, T Whiteside, LA Carreira
Journal of computer-aided molecular design 21 (12), 693-708, 2007
A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure
A Zuccolo, JE Bowers, JC Estill, Z Xiong, M Luo, A Sebastian, ...
Genome biology 12 (5), 1-14, 2011
Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies
BJ Bliss, S Wanke, A Barakat, S Ayyampalayam, N Wickett, PK Wall, ...
BMC Plant Biology 13 (1), 1-26, 2013
Shifts in gene expression profiles are associated with weak and strong Crassulacean acid metabolism
K Heyduk, JN Ray, S Ayyampalayam, J Leebens‐Mack
American journal of botany 105 (3), 587-601, 2018
Generation of a large-scale genomic resource for functional and comparative genomics in Liriodendron tulipifera L.
H Liang, S Ayyampalayam, N Wickett, A Barakat, Y Xu, L Landherr, ...
Tree Genetics & Genomes 7 (5), 941-954, 2011
Draft Genome Sequence of Geobacillus thermopakistaniensis Strain MAS1
MA Siddiqui, N Rashid, S Ayyampalayam, WB Whitman
Genome announcements 2 (3), e00559-14, 2014
Phylogenomic analysis of Ranunculales resolves branching events across the order
AK Lane, MM Augustin, S Ayyampalayam, A Plant, S Gleissberg, ...
Botanical Journal of the Linnean Society 187 (2), 157-166, 2018
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