Mathieu Fourment
Mathieu Fourment
Verified email at uts.edu.au - Homepage
TitleCited byYear
A random effects branch-site model for detecting episodic diversifying selection
SL Kosakovsky Pond, B Murrell, M Fourment, SDW Frost, W Delport, ...
Molecular biology and evolution 28 (11), 3033-3043, 2011
3642011
Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis
DM Wagner, J Klunk, M Harbeck, A Devault, N Waglechner, JW Sahl, ...
The Lancet infectious diseases 14 (4), 319-326, 2014
2642014
PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change
M Fourment, MJ Gibbs
BMC evolutionary biology 6 (1), 1, 2006
1812006
African apes as reservoirs of Plasmodium falciparum and the origin and diversification of the Laverania subgenus
L Duval, M Fourment, E Nerrienet, D Rousset, SA Sadeuh, SM Goodman, ...
Proceedings of the National Academy of Sciences 107 (23), 10561-10566, 2010
1342010
A comparison of common programming languages used in bioinformatics
M Fourment, MR Gillings
BMC bioinformatics 9 (1), 82, 2008
1012008
Genome-scale rates of evolutionary change in bacteria
S Duchêne, KE Holt, FX Weill, S Le Hello, J Hawkey, DJ Edwards, ...
Microbial Genomics 2 (11), 2016
842016
The contrasting phylodynamics of human influenza B viruses
D Vijaykrishna, EC Holmes, U Joseph, M Fourment, YCF Su, R Halpin, ...
Elife 4, e05055, 2015
842015
Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus
KI Bos, A Herbig, J Sahl, N Waglechner, M Fourment, SA Forrest, J Klunk, ...
Elife 5, e12994, 2016
812016
Influenza A virus migration and persistence in North American wild birds
J Bahl, S Krauss, D Kühnert, M Fourment, G Raven, SP Pryor, LJ Niles, ...
PLoS pathogens 9 (8), e1003570, 2013
732013
Antigenic and molecular characterization of avian influenza A (H9N2) viruses, Bangladesh
K Shanmuganatham, MM Feeroz, L Jones-Engel, GJD Smith, M Fourment, ...
Emerging infectious diseases 19 (9), 1393, 2013
662013
Chimpanzee malaria parasites related to Plasmodium ovale in Africa
L Duval, E Nerrienet, D Rousset, SAS Mba, S Houze, M Fourment, ...
PLoS One 4 (5), e5520, 2009
572009
Inconsistencies in estimating the age of HIV-1 subtypes due to heterotachy
JO Wertheim, M Fourment, SL Kosakovsky Pond
Molecular biology and evolution 29 (2), 451-456, 2011
562011
Genetic evolution of the neuraminidase of influenza A (H3N2) viruses from 1968 to 2009 and its correspondence to haemagglutinin evolution
KB Westgeest, M de Graaf, M Fourment, TM Bestebroer, R van Beek, ...
The Journal of general virology 93 (Pt 9), 1996, 2012
462012
Accumulating variation at conserved sites in potyvirus genomes is driven by species discovery and affects degenerate primer design
L Zheng, PJ Wayper, AJ Gibbs, M Fourment, BC Rodoni, MJ Gibbs
PLoS One 3 (2), e1586, 2008
452008
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ...
PLoS computational biology 15 (4), e1006650, 2019
412019
SWeBLAST: a sliding window web-based BLAST tool for recombinant analysis
M Fourment, AJ Gibbs, MJ Gibbs
Journal of Virological Methods 152 (1-2), 98-101, 2008
262008
Molecular epidemiology of clade 1 influenza A viruses (H5N1), southern Indochina peninsula, 2004–2007
P Buchy, M Fourment, S Mardy, S Sorn, D Holl, S Ly, S Vong, V Enouf, ...
Emerging infectious diseases 15 (10), 1641, 2009
252009
The recent establishment of North American H10 lineage influenza viruses in Australian wild waterfowl and the evolution of Australian avian influenza viruses
D Vijaykrishna, YM Deng, YCF Su, M Fourment, P Iannello, GG Arzey, ...
Journal of virology 87 (18), 10182-10189, 2013
232013
Novel non-parametric models to estimate evolutionary rates and divergence times from heterochronous sequence data
M Fourment, EC Holmes
BMC evolutionary biology 14 (1), 163, 2014
182014
Avian influenza virus exhibits distinct evolutionary dynamics in wild birds and poultry
M Fourment, EC Holmes
BMC evolutionary biology 15 (1), 120, 2015
172015
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Articles 1–20