Learning molecular dynamics with simple language model built upon long short-term memory neural network ST Tsai, EJ Kuo, P Tiwary Nature Communications 11, 5115, 2020 | 90 | 2020 |
Kinetics of ligand–protein dissociation from all-atom simulations: Are we there yet? JML Ribeiro, ST Tsai, D Pramanik, Y Wang, P Tiwary Biochemistry 58 (3), 156-165, 2018 | 48 | 2018 |
Multi-dimensional spectral gap optimization of order parameters (SGOOP) through conditional probability factorization Z Smith, ST Tsai, D Pramanik, P Tiwary The Journal of Chemical Physics 149 (23), 234105, 2018 | 43 | 2018 |
Sgoop-d: Estimating kinetic distances and reaction coordinate dimensionality for rare event systems from biased/unbiased simulations ST Tsai, Z Smith, P Tiwary Journal of chemical theory and computation 17 (11), 6757-6765, 2021 | 30 | 2021 |
Driving and characterizing nucleation of urea and glycine polymorphs in water Z Zou, ER Beyerle, ST Tsai, P Tiwary Proceedings of the National Academy of Sciences 120 (7), e2216099120, 2023 | 29 | 2023 |
Reaction coordinates and rate constants for liquid droplet nucleation: Quantifying the interplay between driving force and memory ST Tsai, Z Smith, P Tiwary The Journal of chemical physics 151 (15), 2019 | 29 | 2019 |
Path sampling of recurrent neural networks by incorporating known physics ST Tsai, E Fields, Y Xu, EJ Kuo, P Tiwary Nature Communications 13 (1), 7231, 2022 | 23 | 2022 |
Toward automated sampling of polymorph nucleation and free energies with the SGOOP and metadynamics Z Zou, ST Tsai, P Tiwary The Journal of Physical Chemistry B 125 (47), 13049-13056, 2021 | 19 | 2021 |
Acoustic emission from breaking a bamboo chopstick ST Tsai, LM Wang, P Huang, Z Yang, CD Chang, TM Hong Physical Review Letters 116 (3), 035501, 2016 | 19 | 2016 |
On the distance between A and B in molecular configuration space ST Tsai, P Tiwary Molecular Simulation 47 (5), 449-456, 2021 | 11 | 2021 |
Power-law ansatz in complex systems: Excessive loss of information ST Tsai, CD Chang, CH Chang, MX Tsai, NJ Hsu, TM Hong Physical Review E 92 (6), 062925, 2015 | 10 | 2015 |
Significantly enhanced giant Rashba splitting in a thin film of binary alloy WC Chen, TR Chang, ST Tsai, S Yamamoto, JM Kuo, CM Cheng, ... New Journal of Physics 17 (8), 083015, 2015 | 9 | 2015 |
Crumpling-origami transition for twisting cylindrical shells LM Wang, ST Tsai, C Lee, PY Hsiao, JW Deng, HC Fan Chiang, Y Fei, ... Physical Review E 101 (5), 053001, 2020 | 3 | 2020 |
Classification of complex local environments in systems of particle shapes through shape symmetry-encoded data augmentation SKA Lee, ST Tsai, SC Glotzer The Journal of Chemical Physics 160 (15), 2024 | 2 | 2024 |
Ligand dissociation mechanisms from all-atom simulations: Are we there yet? JML Ribeiro, ST Tsai, D Pramanik, Y Wang, P Tiwary arXiv preprint arXiv:1809.04540, 2018 | 1 | 2018 |
Complex local environments classification of shape particles through shape-symmetry encoded data augmentation. SK Lee, S Glotzer, ST Tsai Bulletin of the American Physical Society, 2024 | | 2024 |
A machine learning strategy for the physics-informed design of nanomaterials using ChIMES M Zhang, B Laubach, A Lee, ST Tsai, J Anderson, S Glotzer, R Lindsey Bulletin of the American Physical Society, 2024 | | 2024 |
Order Parameter-Free Classification of Complex Local Environments of Shape Particles SK Lee, ST Tsai, SC Glotzer 2023 AIChE Annual Meeting, 2023 | | 2023 |
Building Kinetic Models for Complex Systems with Arbitrary Memories ST Tsai University of Maryland, College Park, 2022 | | 2022 |
General Mechanism of Evolution Shared by Proteins and Words LM Wang, HY Lai, ST Tsai, CS Ng, SJ Wu, MX Tsai, YC Su, DW Wang, ... arXiv preprint arXiv:2012.14309, 2020 | | 2020 |