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Joshua C. Denny
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Year
Genetics of rheumatoid arthritis contributes to biology and drug discovery
Y Okada, D Wu, G Trynka, T Raj, C Terao, K Ikari, Y Kochi, K Ohmura, ...
Nature 506 (7488), 376-381, 2014
19852014
Defining the role of common variation in the genomic and biological architecture of adult human height
AR Wood, T Esko, J Yang, S Vedantam, TH Pers, S Gustafsson, AY Chu, ...
Nature genetics 46 (11), 1173-1186, 2014
18302014
A gene-based association method for mapping traits using reference transcriptome data
ER Gamazon, HE Wheeler, KP Shah, SV Mozaffari, K Aquino-Michaels, ...
Nature genetics 47 (9), 1091-1098, 2015
11772015
PheWAS: demonstrating the feasibility of a phenome-wide scan to discover gene–disease associations
JC Denny, MD Ritchie, MA Basford, JM Pulley, L Bastarache, ...
Bioinformatics 26 (9), 1205-1210, 2010
9112010
Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data
JC Denny, L Bastarache, MD Ritchie, RJ Carroll, R Zink, JD Mosley, ...
Nature biotechnology 31 (12), 1102-1111, 2013
7752013
Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies
W Zhou, JB Nielsen, LG Fritsche, R Dey, ME Gabrielsen, BN Wolford, ...
Nature genetics 50 (9), 1335-1341, 2018
6042018
MedEx: a medication information extraction system for clinical narratives
H Xu, SP Stenner, S Doan, KB Johnson, LR Waitman, JC Denny
Journal of the American Medical Informatics Association 17 (1), 19, 2010
5612010
The electronic medical records and genomics (eMERGE) network: past, present, and future
O Gottesman, H Kuivaniemi, G Tromp, WA Faucett, R Li, TA Manolio, ...
Genetics in Medicine 15 (10), 761-771, 2013
5052013
The “All of Us” Research Program
All of Us Research Program Investigators
New England Journal of Medicine 381 (7), 668-676, 2019
4362019
Inactivating Mutations in NPC1L1 and Protection from Coronary Heart Disease
Myocardial Infarction Genetics Consortium Investigators
New England Journal of Medicine 371 (22), 2072-2082, 2014
4152014
Exome-wide association study of plasma lipids in> 300,000 individuals
DJ Liu, GM Peloso, H Yu, AS Butterworth, X Wang, A Mahajan, ...
Nature genetics 49 (12), 1758-1766, 2017
4112017
Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function
C Pattaro, A Teumer, M Gorski, AY Chu, M Li, V Mijatovic, M Garnaas, ...
Nature communications 7 (1), 1-19, 2016
3922016
Multi-ethnic genome-wide association study for atrial fibrillation
C Roselli, MD Chaffin, LC Weng, S Aeschbacher, G Ahlberg, CM Albert, ...
Nature genetics 50 (9), 1225-1233, 2018
3882018
Operational implementation of prospective genotyping for personalized medicine: the design of the Vanderbilt PREDICT project
JM Pulley, JC Denny, JF Peterson, GR Bernard, CL Vnencak-Jones, ...
Clinical Pharmacology & Therapeutics, 2012
3812012
Data from clinical notes: a perspective on the tension between structure and flexible documentation
ST Rosenbloom, JC Denny, H Xu, N Lorenzi, WW Stead, KB Johnson
Journal of the American Medical Informatics Association 18 (2), 181-186, 2011
3582011
Clinical and genetic factors associated with cutaneous squamous cell carcinoma in kidney and heart transplant recipients
ML Sanders, JH Karnes, JC Denny, DM Roden, TA Ikizler, KA Birdwell
Transplantation direct 1 (4), 2015
3562015
Coding Variation in ANGPTL4, LPL, and SVEP1 and the Risk of Coronary Disease
Myocardial Infarction Genetics and CARDIoGRAM Exome Consortia Investigators
New England Journal of Medicine 374 (12), 1134-1144, 2016
3542016
Artificial intelligence, bias and clinical safety
R Challen, J Denny, M Pitt, L Gompels, T Edwards, K Tsaneva-Atanasova
BMJ Quality & Safety 28 (3), 231-237, 2019
3532019
Validation of electronic medical record-based phenotyping algorithms: results and lessons learned from the eMERGE network
KM Newton, PL Peissig, AN Kho, SJ Bielinski, RL Berg, V Choudhary, ...
Journal of the American Medical Informatics Association 20 (e1), e147-e154, 2013
3442013
Robust replication of genotype-phenotype associations across multiple diseases in an electronic medical record
MD Ritchie, JC Denny, DC Crawford, AH Ramirez, JB Weiner, JM Pulley, ...
The American Journal of Human Genetics 86 (4), 560-572, 2010
3442010
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