Rob Edwards

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Forest RohwerSan Diego State UniversityVerified email at mail.sdsu.edu
Liz DinsdaleMatthew Flinders Fellow of Marine Biology, Professor, Flinders University, South AustraliaVerified email at flinders.edu.au
Robert SchmiederSan Diego State UniversityVerified email at sciences.sdsu.edu
Rick StevensProfessor of Computer Science, University of ChicagoVerified email at ci.uchicago.edu
Bas E. DutilhTheoretical Biology and Bioinformatics, Utrecht UniversityVerified email at uu.nl
Robert OlsonArgonne National LaboratoryVerified email at mcs.anl.gov
linda wegley kellySan Diego State UniversityVerified email at sdsu.edu
Mya BreitbartUniversity of South FloridaVerified email at marine.usf.edu
Genivaldo Gueiros Z. SilvaSan Diego State UniversityVerified email at rohan.sdsu.edu
Katelyn McNairResearch Associate, San Diego State UniversityVerified email at mail.sdsu.edu
Florent E AnglyGenomic data analyst, The University of QueenslandVerified email at uq.edu.au
Veronika VonsteinFellowship for Interpretation of GenomesVerified email at theFIG.info
Gary J. OlsenProfessor of Microbiology, University of Illinois at Urbana-ChampaignVerified email at life.uiuc.edu
Fabiano ThompsonFederal University of Rio de Janeiro (UFRJ)Verified email at biologia.ufrj.br
Gordon D PuschFellowship for Interpretation of GenomesVerified email at xnet.com
Ramy K. AzizProfessor of Microbiology & Immunology, CCHE 57357 & Faculty of Pharmacy, Cairo UniversityVerified email at pharma.cu.edu.eg
Peter SalamonProfessor of Mathematics, San Diego State UniversityVerified email at sdsu.edu
Yan Wei LimSan Diego State University, San Diego, CAVerified email at rohan.sdsu.edu
Stanley MaloySan Diego State UniversityVerified email at sdsu.edu
Rebecca Vega ThurberAssociate Professor of Microbiology Oregon State UniversityVerified email at oregonstate.edu

Rob Edwards

Matthew Flinders Fellow of Bioinformatics, Flinders University, Adelaide, SA, Australia

Verified email at flinders.edu.au - Homepage

Metagenomics Microbial Genomics Bioinformatics Data Analysis


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
The RAST Server: rapid annotations using subsystems technology R Aziz, D Bartels, A Best, M DeJongh, T Disz, R Edwards, K Formsma, ... BMC genomics 9 (1), 75, 2008	8530	2008
Quality control and preprocessing of metagenomic datasets R Schmieder, R Edwards Bioinformatics 27 (6), 863, 2011	3338	2011
The metagenomics RAST server–a public resource for the automatic phylogenetic and functional analysis of metagenomes F Meyer, D Paarmann, M D'Souza, R Olson, EM Glass, M Kubal, ... BMC bioinformatics 9 (1), 386, 2008	3263	2008
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST) R Overbeek, R Olson, GD Pusch, GJ Olsen, JJ Davis, T Disz, RA Edwards, ... Nucleic acids research 42 (D1), D206-D214, 2014	2816	2014
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ... Nucleic acids research 33 (17), 5691-5702, 2005	1918	2005
Community genomics among stratified microbial assemblages in the ocean's interior EF DeLong, CM Preston, T Mincer, V Rich, SJ Hallam, NU Frigaard, ... Science 311 (5760), 496-503, 2006	1340	2006
The minimum information about a genome sequence (MIGS) specification D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ... Nature biotechnology 26 (5), 541-547, 2008	1173	2008
RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes T Brettin, JJ Davis, T Disz, RA Edwards, S Gerdes, GJ Olsen, R Olson, ... Scientific reports 5 (1), 1-6, 2015	1021	2015
The marine viromes of four oceanic regions FE Angly, B Felts, M Breitbart, P Salamon, RA Edwards, C Carlson, ... PLoS biology 4 (11), e368, 2006	1017	2006
Functional metagenomic profiling of nine biomes EA Dinsdale, RA Edwards, D Hall, F Angly, M Breitbart, JM Brulc, ... Nature 452 (7187), 629-632, 2008	970	2008
Viral metagenomics RA Edwards, F Rohwer Nature Reviews Microbiology 3 (6), 504-510, 2005	922	2005
Nitrogen control in bacteria. MJ Merrick, RA Edwards Microbiological reviews 59 (4), 604-622, 1995	788	1995
Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases JM Brulc, DA Antonopoulos, MEB Miller, MK Wilson, AC Yannarell, ... Proceedings of the National Academy of Sciences 106 (6), 1948-1953, 2009	670	2009
The Phage Proteomic Tree: a genome-based taxonomy for phage F Rohwer, R Edwards Journal of bacteriology 184 (16), 4529-4535, 2002	643	2002
Using pyrosequencing to shed light on deep mine microbial ecology R Edwards, B Rodriguez-Brito, L Wegley, M Haynes, M Breitbart, ... BMC genomics 7 (1), 57, 2006	587	2006
Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets R Schmieder, R Edwards PLoS One 6 (3), e17288, 2011	577	2011
Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil N Fierer, M Breitbart, J Nulton, P Salamon, C Lozupone, R Jones, ... Applied and Environmental Microbiology 73 (21), 7059-7066, 2007	557	2007
Improved allelic exchange vectors and their use to analyze 987P fimbria gene expression RA Edwards, LH Keller, DM Schifferli Gene 207 (2), 149-157, 1998	536	1998
Metagenomic analysis of stressed coral holobionts RV Thurber, D Willner‐Hall, B Rodriguez‐Mueller, C Desnues, ... Environmental microbiology 11 (8), 2148-2163, 2009	535	2009
Indirect effects of algae on coral: algae‐mediated, microbe‐induced coral mortality JE Smith, M Shaw, RA Edwards, D Obura, O Pantos, E Sala, SA Sandin, ... Ecology letters 9 (7), 835-845, 2006	502	2006

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