Thomas Connor
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Year
A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers
MA Quail, M Smith, P Coupland, TD Otto, SR Harris, TR Connor, A Bertoni, ...
BMC genomics 13 (1), 341, 2012
18592012
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
NJ Croucher, AJ Page, TR Connor, AJ Delaney, JA Keane, SD Bentley, ...
Nucleic acids research 43 (3), e15-e15, 2015
6312015
Emergence and global spread of epidemic healthcare-associated Clostridium difficile
M He, F Miyajima, P Roberts, L Ellison, DJ Pickard, MJ Martin, TR Connor, ...
Nature genetics 45 (1), 109-113, 2013
5732013
Evidence for several waves of global transmission in the seventh cholera pandemic
A Mutreja, DW Kim, NR Thomson, TR Connor, JH Lee, S Kariuki, ...
Nature 477 (7365), 462-465, 2011
5062011
Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice
TD Lawley, S Clare, AW Walker, MD Stares, TR Connor, C Raisen, ...
PLoS pathogens 8 (10), 2012
4882012
Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health
KE Holt, H Wertheim, RN Zadoks, S Baker, CA Whitehouse, D Dance, ...
Proceedings of the National Academy of Sciences 112 (27), E3574-E3581, 2015
4682015
Hierarchical and spatially explicit clustering of DNA sequences with BAPS software
L Cheng, TR Connor, J Sirén, DM Aanensen, J Corander
Molecular biology and evolution 30 (5), 1224-1228, 2013
3382013
Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa
CK Okoro, RA Kingsley, TR Connor, SR Harris, CM Parry, ...
Nature genetics 44 (11), 1215, 2012
2972012
Distinguishable epidemics of multidrug-resistant Salmonella Typhimurium DT104 in different hosts
AE Mather, SWJ Reid, DJ Maskell, J Parkhill, MC Fookes, SR Harris, ...
Science 341 (6153), 1514-1517, 2013
2552013
Genome Sequencing and Analysis of the Tasmanian Devil and Its Transmissible Cancer
EP Murchison, OB Schulz-Trieglaff, Z Ning, LB Alexandrov, MJ Bauer, ...
Cell 148 (4), 780-791, 2012
2452012
Detection of recombination events in bacterial genomes from large population samples
P Marttinen, WP Hanage, NJ Croucher, TR Connor, SR Harris, ...
Nucleic acids research 40 (1), e6-e6, 2012
1832012
Hyper-recombination, diversity, and antibiotic resistance in pneumococcus
WP Hanage, C Fraser, J Tang, TR Connor, J Corander
Science 324 (5933), 1454-1457, 2009
1622009
Salmonella bongori provides insights into the evolution of the Salmonellae
M Fookes, GN Schroeder, GC Langridge, CJ Blondel, C Mammina, ...
PLoS pathogens 7 (8), 2011
1452011
Assessing the reliability of eBURST using simulated populations with known ancestry
KME Turner, WP Hanage, C Fraser, TR Connor, BG Spratt
BMC microbiology 7 (1), 30, 2007
1422007
Identification of enterotoxigenic Escherichia coli (ETEC) clades with long-term global distribution
A von Mentzer, TR Connor, LH Wieler, T Semmler, A Iguchi, NR Thomson, ...
Nature genetics 46 (12), 1321, 2014
1382014
Patterns of genome evolution that have accompanied host adaptation in Salmonella
GC Langridge, M Fookes, TR Connor, T Feltwell, N Feasey, BN Parsons, ...
Proceedings of the National Academy of Sciences 112 (3), 863-868, 2015
1342015
Whole genome sequencing reveals potential spread of Clostridium difficile between humans and farm animals in the Netherlands, 2002 to 2011
CW Knetsch, TR Connor, A Mutreja, SM Van Dorp, IM Sanders, ...
Euro surveillance: bulletin Europeen sur les maladies transmissibles …, 2014
1342014
Parallel independent evolution of pathogenicity within the genus Yersinia
S Reuter, TR Connor, L Barquist, D Walker, T Feltwell, SR Harris, ...
Proceedings of the National Academy of Sciences 111 (18), 6768-6773, 2014
1172014
Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study
KS Baker, TJ Dallman, PM Ashton, M Day, G Hughes, PD Crook, ...
The Lancet infectious diseases 15 (8), 913-921, 2015
1132015
Signatures of adaptation in human invasive Salmonella Typhimurium ST313 populations from sub-Saharan Africa
CK Okoro, L Barquist, TR Connor, SR Harris, S Clare, MP Stevens, ...
PLoS neglected tropical diseases 9 (3), 2015
782015
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Articles 1–20