Toni Gabaldon

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Citations	22951	16670
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Marina Marcet-HoubenBSCVerified email at bsc.es
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA), Madrid, SpainVerified email at embl.de
Salvador Capella-GutiérrezBarcelona Supercomputing Centre (BSC)Verified email at bsc.es
Leszek PryszczCRG, BarcelonaVerified email at crg.es
Martijn HuynenCMBI, Radboud University Medical CentreVerified email at cmbi.ru.nl
Joaquin DopazoHead of the Clinical Bioinformatics Area, FPS, Hospital Virgen del Rocio, Sevilla, SpainVerified email at juntadeandalucia.es
Attila GacserUniversity of Szeged, Department of MicrobiologyVerified email at bio.u-szeged.hu
Ewa KsiezopolskaVerified email at crg.eu
Christophe DessimozSNSF Professor at UNIL, Professor at UCLVerified email at ucl.ac.uk
Alexandros A PittisEuropean Molecular Biology Laboratory (EMBL)Verified email at embl.de
Miguel Ángel Naranjo OrtizPostdoctoral researcherVerified email at clarku.edu
Cinta Pegueroles QueraltUniversitat de Barcelona, UBVerified email at ub.edu
teun boekhoutCBS Fungal Biodiversity CentreVerified email at cbs.knaw.nl
Jozef NosekProfessor of Biochemistry, Comenius University in Bratislava, SlovakiaVerified email at uniba.sk
Irene JulcaNanyang Technological University (NTU)Verified email at ntu.edu.sg
Laia Carreté, PhDUniversitat de BarcelonaVerified email at uoc.edu
Pedro González-TorresPostDoc position, Bioinformatics and Genomics Program, Centre for Genomic Regulation (CRG)Verified email at crg.eu
Sofia K. ForslundJunior Group Leader, ECRC (joint Max Delbrück Center and Charité University Hospital unit), BerlinVerified email at embl.de
Fran SupekGenome Data Science (group leader), IRB Barcelona; ICREA Research ProfessorVerified email at irb.hr
Roderic GuigoProfessor of Bioinformatics, Center for Genomic Regulation, Universitat Pompeu FabraVerified email at crg.cat

Toni Gabaldon

Group Leader, Institute for Research in Biomedicine (IRB) and Barcelona Supercomputing Centre (BSC)

Verified email at crg.es - Homepage

Evolution Phylogenomics Bioinformatics Phylogenetics Genomics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses S Capella-Gutiérrez, JM Silla-Martínez, T Gabaldón Bioinformatics 25 (15), 1972-1973, 2009	3940	2009
Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346 (6215), 1320-1331, 2014	1385	2014
Coronavirus disease 2019 (COVID-19): emerging and future challenges for dental and oral medicine L Meng, F Hua, Z Bian Journal of dental research 99 (5), 481-487, 2020	1204	2020
Genome sequence of the pea aphid Acyrthosiphon pisum International Aphid Genomics Consortium PLOS biol 8 (2), e1000313, 2010	806	2010
The genome of melon (Cucumis melo L.) J Garcia-Mas, A Benjak, W Sanseverino, M Bourgeois, G Mir, ... Proceedings of the National Academy of Sciences 109 (29), 11872-11877, 2012	520	2012
eggNOG v4. 0: nested orthology inference across 3686 organisms S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ... Nucleic acids research 42 (D1), D231-D239, 2014	424	2014
Synonymous mutations frequently act as driver mutations in human cancers F Supek, B Miñana, J Valcárcel, T Gabaldón, B Lehner Cell 156 (6), 1324-1335, 2014	422	2014
ETE: a python Environment for Tree Exploration J Huerta-Cepas, J Dopazo, T Gabaldón BMC bioinformatics 11 (1), 1-7, 2010	393	2010
Functional and evolutionary implications of gene orthology T Gabaldón, EV Koonin Nature Reviews Genetics 14 (5), 360-366, 2013	392	2013
The genome of the recently domesticated crop plant sugar beet (Beta vulgaris) JC Dohm, AE Minoche, D Holtgräwe, S Capella-Gutiérrez, F Zakrzewski, ... Nature 505 (7484), 546-549, 2014	391	2014
Immunity and other defenses in pea aphids, Acyrthosiphon pisum NM Gerardo, B Altincicek, C Anselme, H Atamian, SM Barribeau, ... Genome biology 11 (2), 1-17, 2010	386	2010
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida J Collén, B Porcel, W Carré, SG Ball, C Chaparro, T Tonon, T Barbeyron, ... Proceedings of the National Academy of Sciences 110 (13), 5247-5252, 2013	276	2013
An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17 (1), 1-19, 2016	275	2016
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ... Science 346 (6215), 2014	258	2014
An anaerobic mitochondrion that produces hydrogen B Boxma, RM de Graaf, GWM van der Staay, TA van Alen, G Ricard, ... Nature 434 (7029), 74-79, 2005	256	2005
The i5K Initiative: advancing arthropod genomics for knowledge, human health, agriculture, and the environment i5K Consortium Journal of Heredity 104 (5), 595-600, 2013	251	2013
Tracing the evolution of a large protein complex in the eukaryotes, NADH: ubiquinone oxidoreductase (Complex I) T Gabaldón, D Rainey, MA Huynen Journal of molecular biology 348 (4), 857-870, 2005	244	2005
Redundans: an assembly pipeline for highly heterozygous genomes LP Pryszcz, T Gabaldón Nucleic acids research 44 (12), e113-e113, 2016	230	2016
Beyond the whole-genome duplication: phylogenetic evidence for an ancient interspecies hybridization in the baker's yeast lineage M Marcet-Houben, T Gabaldón PLoS Biol 13 (8), e1002220, 2015	224	2015
Acquisition of prokaryotic genes by fungal genomes M Marcet-Houben, T Gabaldón Trends in Genetics 26 (1), 5-8, 2010	211	2010

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