Samantha Lycett
Samantha Lycett
Roslin Institiute, University of Edinburgh
Verified email at - Homepage
Cited by
Cited by
Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic
GJD Smith, D Vijaykrishna, J Bahl, SJ Lycett, M Worobey, OG Pybus, ...
Nature 459 (7250), 1122-1125, 2009
The genesis and source of the H7N9 influenza viruses causing human infections in China
TTY Lam, J Wang, Y Shen, B Zhou, L Duan, CL Cheung, C Ma, SJ Lycett, ...
Nature 502 (7470), 241-244, 2013
Transmission network parameters estimated from HIV sequences for a nationwide epidemic
AJ Leigh Brown, SJ Lycett, L Weinert, GJ Hughes, E Fearnhill, DT Dunn
Journal of Infectious Diseases 204 (9), 1463-1469, 2011
Automated analysis of phylogenetic clusters
M Ragonnet-Cronin, E Hodcroft, S Hué, E Fearnhill, V Delpech, ...
BMC bioinformatics 14 (1), 317, 2013
Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom
GJ Hughes, E Fearnhill, D Dunn, SJ Lycett, A Rambaut, AJL Brown, ...
PLoS Pathog 5 (9), e1000590, 2009
Time resolved study of self‐assembled InAs quantum dots
H Yu, S Lycett, C Roberts, R Murray
Applied Physics Letters 69 (26), 4087-4089, 1996
Fast dating using least-squares criteria and algorithms
TH To, M Jung, S Lycett, O Gascuel
Systematic biology 65 (1), 82-97, 2016
Role for migratory wild birds in the global spread of avian influenza H5N8
Global Consortium for H5N8 and Related Influenza Viruses
Science 354 (6309), 213-217, 2016
Supersize me: how whole-genome sequencing and big data are transforming epidemiology
RR Kao, DT Haydon, SJ Lycett, PR Murcia
Trends in microbiology 22 (5), 282-291, 2014
Reassortment patterns of avian influenza virus internal segments among different subtypes
L Lu, SJ Lycett, AJL Brown
BMC evolutionary biology 14 (1), 16, 2014
The short stalk length of highly pathogenic avian influenza H5N1 virus neuraminidase limits transmission of pandemic H1N1 virus in ferrets
D Blumenkrantz, KL Roberts, H Shelton, S Lycett, WS Barclay
Journal of virology 87 (19), 10539-10551, 2013
Reassortment between influenza B lineages and the emergence of a coadapted PB1–PB2–HA gene complex
G Dudas, T Bedford, S Lycett, A Rambaut
Molecular biology and evolution 32 (1), 162-172, 2015
Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions
S Hué, AE Brown, M Ragonnet-Cronin, SJ Lycett, DT Dunn, E Fearnhill, ...
Aids 28 (13), 1967-1975, 2014
Detection of mammalian virulence determinants in highly pathogenic avian influenza H5N1 viruses: multivariate analysis of published data
SJ Lycett, MJ Ward, FI Lewis, AFY Poon, SLK Pond, AJL Brown
Journal of virology 83 (19), 9901-9910, 2009
The effect of the PB2 mutation 627K on highly pathogenic H5N1 avian influenza virus is dependent on the virus lineage
JS Long, WA Howard, A Núñez, O Moncorgé, S Lycett, J Banks, ...
Journal of virology 87 (18), 9983-9996, 2013
Estimating reassortment rates in co-circulating Eurasian swine influenza viruses
SJ Lycett, G Baillie, E Coulter, S Bhatt, P Kellam, JW McCauley, ...
The Journal of general virology 93 (Pt 11), 2326, 2012
Phylogenetic tools for generalized HIV-1 epidemics: findings from the PANGEA-HIV methods comparison
O Ratmann, EB Hodcroft, M Pickles, A Cori, M Hall, S Lycett, C Colijn, ...
Molecular biology and evolution 34 (1), 185-203, 2017
Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis
H Trewby, D Wright, EL Breadon, SJ Lycett, TR Mallon, C McCormick, ...
Epidemics 14, 26-35, 2016
The evolutionary dynamics of influenza A virus adaptation to mammalian hosts
S Bhatt, TT Lam, SJ Lycett, AJ Leigh Brown, TA Bowden, EC Holmes, ...
Philosophical Transactions of the Royal Society B: Biological Sciences 368 …, 2013
Investigation of influenza virus polymerase activity in pig cells
O Moncorgé, JS Long, AV Cauldwell, H Zhou, SJ Lycett, WS Barclay
Journal of virology 87 (1), 384-394, 2013
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