| Long noncoding RNAs and the genetics of cancer SW Cheetham, F Gruhl, JS Mattick, ME Dinger British journal of cancer 108 (12), 2419-2425, 2013 | 820 | 2013 |
| Overcoming challenges and dogmas to understand the functions of pseudogenes SW Cheetham, GJ Faulkner, ME Dinger Nature Reviews Genetics 21 (3), 191-201, 2020 | 167 | 2020 |
| Cell-type-specific profiling of protein–DNA interactions without cell isolation using targeted DamID with next-generation sequencing OJ Marshall, TD Southall, SW Cheetham, AH Brand Nature protocols 11 (9), 1586-1598, 2016 | 122 | 2016 |
| Nanopore sequencing enables comprehensive transposable element epigenomic profiling AD Ewing, N Smits, FJ Sanchez-Luque, J Faivre, PM Brennan, ... Molecular Cell 80 (5), 915-928. e5, 2020 | 108 | 2020 |
| LINE-1 evasion of epigenetic repression in humans FJ Sanchez-Luque, MJHC Kempen, P Gerdes, DB Vargas-Landin, ... Molecular cell 75 (3), 590-604. e12, 2019 | 106 | 2019 |
| Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes DK Gascoigne, SW Cheetham, PB Cattenoz, MB Clark, PP Amaral, ... Bioinformatics 28 (23), 3042-3050, 2012 | 89 | 2012 |
| Targeted DamID reveals differential binding of mammalian pluripotency factors SW Cheetham, WH Gruhn, J van den Ameele, R Krautz, TD Southall, ... Development 145 (20), dev170209, 2018 | 48 | 2018 |
| DamID as a versatile tool for understanding gene regulation GN Aughey, SW Cheetham, TD Southall Development 146 (6), dev173666, 2019 | 46 | 2019 |
| The Evx1/Evx1as gene locus regulates anterior-posterior patterning during gastrulation CC Bell, PP Amaral, A Kalsbeek, GW Magor, KR Gillinder, P Tangermann, ... Scientific reports 6 (1), 26657, 2016 | 30 | 2016 |
| Long-read cDNA sequencing identifies functional pseudogenes in the human transcriptome RL Troskie, Y Jafrani, TR Mercer, AD Ewing, GJ Faulkner, SW Cheetham Genome biology 22 (1), 146, 2021 | 28 | 2021 |
| RNA-DamID reveals cell-type-specific binding of roX RNAs at chromatin-entry sites SW Cheetham, AH Brand Nature structural & molecular biology 25 (1), 109-114, 2018 | 28 | 2018 |
| Methylartist: tools for visualizing modified bases from nanopore sequence data SW Cheetham, M Kindlova, AD Ewing Bioinformatics 38 (11), 3109-3112, 2022 | 27 | 2022 |
| Processed pseudogenes: a substrate for evolutionary innovation: retrotransposition contributes to genome evolution by propagating pseudogene sequences with rich regulatory … RL Troskie, GJ Faulkner, SW Cheetham BioEssays 43 (11), 2100186, 2021 | 16 | 2021 |
| High resolution temporal transcriptomics of mouse embryoid body development reveals complex expression dynamics of coding and noncoding loci BS Gloss, B Signal, SW Cheetham, F Gruhl, DC Kaczorowski, AC Perkins, ... Scientific reports 7 (1), 6731, 2017 | 16 | 2017 |
| Freedom of expression: cell‐type‐specific gene profiling L Otsuki, SW Cheetham, AH Brand Wiley Interdisciplinary Reviews: Developmental Biology 3 (6), 429-443, 2014 | 10 | 2014 |
| Insulin finds its niche SW Cheetham, AH Brand Science 340 (6134), 817-818, 2013 | 10 | 2013 |
| Single-molecule simultaneous profiling of DNA methylation and DNA-protein interactions with Nanopore-DamID SW Cheetham, YMA Jafrani, SB Andersen, N Jansz, M Kindlova, ... BioRxiv, 2021.08. 09.455753, 2021 | 5 | 2021 |
| Reduced chromatin accessibility correlates with resistance to Notch activation J Van Den Ameele, R Krautz, SW Cheetham, APA Donovan, ... Nature Communications 13 (1), 2210, 2022 | 4 | 2022 |
| Somatic retrotransposition in the developing rhesus macaque brain V Billon, FJ Sanchez-Luque, J Rasmussen, GO Bodea, DJ Gerhardt, ... Genome Research 32 (7), 1298-1314, 2022 | 3 | 2022 |
| In vivo targeted DamID identifies CHD8 genomic targets in fetal mouse brain AA Wade, J Van Den Ameele, SW Cheetham, R Yakob, AH Brand, ... Iscience 24 (11), 2021 | 3* | 2021 |
Marcel E. DingerUniversity of SydneyVerified email at marceldinger.net
