Yu Mu
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Simultaneous denoising, deconvolution, and demixing of calcium imaging data
EA Pnevmatikakis, D Soudry, Y Gao, TA Machado, J Merel, D Pfau, ...
Neuron 89 (2), 285-299, 2016
Light-sheet functional imaging in fictively behaving zebrafish
N Vladimirov, Y Mu, T Kawashima, DV Bennett, CT Yang, LL Looger, ...
Nature methods 11 (9), 883-884, 2014
Mapping brain activity at scale with cluster computing
J Freeman, N Vladimirov, T Kawashima, Y Mu, NJ Sofroniew, DV Bennett, ...
Nature methods 11 (9), 941-950, 2014
Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion
TW Dunn*, Y Mu*, S Narayan, O Randlett, EA Naumann, CT Yang, ...
Elife 5, e12741, 2016
Glia accumulate evidence that actions are futile and suppress unsuccessful behavior
Y Mu*, DV Bennett*, M Rubinov*, S Narayan, CT Yang, M Tanimoto, ...
Cell 178 (1), 27-43. e19, 2019
Brain-wide Organization of Neuronal Activity and Convergent Sensorimotor Transformations in Larval Zebrafish
Xiuye Chen*, Yu Mu*,Yu Hu*, Aaron T. Kuan*, Maxim Nikitchenko, Owen Randlett ...
Neuron 100 (4), 876-890, 2018
Visual input modulates audiomotor function via hypothalamic dopaminergic neurons through a cooperative mechanism
Y Mu*, X Li*, B Zhang, J Du
Neuron 75 (4), 688-699, 2012
Signal propagation in complex networks
P Ji, J Ye, Y Mu, W Lin, Y Tian, C Hens, M Perc, Y Tang, J Sun, J Kurths
Physics reports 1017, 1-96, 2023
Grhl2 deficiency impairs otic development and hearing ability in a zebrafish model of the progressive dominant hearing loss DFNA28
Y Han, Y Mu, X Li, P Xu, J Tong, Z Liu, T Ma, G Zeng, S Yang, J Du, ...
Human molecular genetics 20 (16), 3213-3226, 2011
Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function
N Vladimirov, C Wang, B Höckendorf, A Pujala, M Tanimoto, Y Mu, ...
Nature methods 15 (12), 1117-1125, 2018
Multi-scale approaches for high-speed imaging and analysis of large neural populations
J Friedrich, W Yang, D Soudry, Y Mu, MB Ahrens, R Yuste, DS Peterka, ...
PLoS computational biology 13 (8), e1005685, 2017
Overexpression of Wlds or Nmnat2 in mauthner cells by single‐cell electroporation delays axon degeneration in live zebrafish
Y Feng, T Yan, J Zheng, X Ge, Y Mu, Y Zhang, D Wu, J Du, Q Zhai
Journal of neuroscience research 88 (15), 3319-3327, 2010
Brain-wide, scale-wide physiology underlying behavioral flexibility in zebrafish
Y Mu, S Narayan, BD Mensh, MB Ahrens
Current Opinion in Neurobiology 64, 151-160, 2020
Fast constrained non-negative matrix factorization for whole-brain calcium imaging data
J Friedrich, D Soudry, Y Mu, J Freeman, MB Ahrens, L Paninski
NIPS workshop on statistical methods for understanding neural systems, 2015
Dimensionality reduction of calcium-imaged neuronal population activity
TH Koh, WE Bishop, T Kawashima, BB Jeon, R Srinivasan, Y Mu, Z Wei, ...
Nature computational science 3 (1), 71-85, 2023
Locus coeruleus in non-mammalian vertebrates
S Wang, Z Wang, Y Mu
Brain Sciences 12 (2), 134, 2022
Time-resolved correlation of distributed brain activity tracks EI balance and accounts for diverse scale-free phenomena
A Nanda, GW Johnson, Y Mu, MB Ahrens, C Chang, DJ Englot, ...
Cell reports 42 (4), 2023
Real-time analysis of large-scale neuronal imaging enables closed-loop investigation of neural dynamics
CF Shang, YF Wang, MT Zhao, QX Fan, S Zhao, Y Qian, SJ Xu, Y Mu, ...
Nature Neuroscience 27 (5), 1014-1018, 2024
A genetically encoded ratiometric indicator for tryptophan
R Tao*, K Wang*, T Chen*, X Zhang, J Cao, W Zhao, J Du, Y Mu
Cell Discovery 9 (1), 106, 2023
Simultaneous multi-plane imaging light-sheet fluorescence microscopy for simultaneously acquiring neuronal activity at varying depths
Z Jiao, Z Zhou, Z Chen, J Xie, Y Mu, J Du, L Fu
Optica 10 (2), 239-247, 2023
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