DDMut: predicting effects of mutations on protein stability using deep learning Y Zhou, Q Pan, DEV Pires, CHM Rodrigues, DB Ascher Nucleic Acids Research 51 (W1), W122-W128, 2023 | 74 | 2023 |
Structure-guided machine learning prediction of drug resistance mutations in Abelson 1 kinase Y Zhou, S Portelli, M Pat, CHM Rodrigues, TB Nguyen, DEV Pires, ... Computational and Structural Biotechnology Journal 19, 5381-5391, 2021 | 14 | 2021 |
kinCSM: Using graph‐based signatures to predict small molecule CDK2 inhibitors Y Zhou, R Al‐Jarf, A Alavi, TB Nguyen, CHM Rodrigues, DEV Pires, ... Protein Science 31 (11), e4453, 2022 | 7* | 2022 |
Joint genotypic and phenotypic outcome modeling improves base editing variant effect quantification J Ryu, S Barkal, T Yu, M Jankowiak, Y Zhou, M Francoeur, QV Phan, Z Li, ... Nature Genetics, 1-13, 2024 | 6 | 2024 |
DDMut-PPI: predicting effects of mutations on protein–protein interactions using graph-based deep learning Y Zhou, YC Myung, CHM Rodrigues, DB Ascher Nucleic Acids Research, gkae412, 2024 | 4 | 2024 |