Mark Pallen

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	All	Since 2016
Citations	18887	6557
h-index	72	42
i10-index	164	111

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Co-authors

Nicholas J LomanProfessor of Microbial Genomics and Bioinformatics, University of BirminghamVerified email at bham.ac.uk
Chrystala ConstantinidouDivision of Microbiology and Infection, Warwick Medical School, University of WarwickVerified email at warwick.ac.uk
Charles W PennProfessor of Molecular Microbiology, University of BirminghamVerified email at bham.ac.uk
Brendan WrenProfessor of Pathogen Molecular BiologyVerified email at lshtm.ac.uk
Jacqueline Z-M ChanOxford Gene TechnologyVerified email at ogt.com
Martin SergeantWarwick Medical SchoolVerified email at warwick.ac.uk
gemma kaySenior Research Scientist, Quadram Institute BioscienceVerified email at quadram.ac.uk
Ian R. HendersonUniversity of QueenslandVerified email at uq.edu.au
Scott BeatsonThe University of QueenslandVerified email at uq.edu.au
Lewis BingleSenior Lecturer in Microbiology, University of Sunderland, UKVerified email at sunderland.ac.uk
Gurdyal BesraBardrick Professor of Microbial Physiology & ChemistryVerified email at bham.ac.uk
George WeinstockDirector of Microbial Genomics, Professor, Jackson LaboratoryVerified email at jax.org
Steve BusbyProfessor of Biochemistry, University of BirminghamVerified email at bham.ac.uk
Joshua QuickUKRI Future Leaders Fellow, University of BirminghamVerified email at bham.ac.uk
Jon HobmanUniversity of NottinghamVerified email at nottingham.ac.uk
Andrey V. KarlyshevProfessor of Microbiology, Kingston UniversityVerified email at kingston.ac.uk
Andrew MillardAssociate Professor, University of LeicesterVerified email at le.ac.uk
John WainQuadram Institute BiosciencesVerified email at jidc.org
Jay HintonProfessor of Microbial Pathogenesis, University of LiverpoolVerified email at liv.ac.uk
Kim RutherfordUniversity of Cambridge, UKVerified email at cam.ac.uk

Mark Pallen

Quadram Institute and University of East Anglia

Verified email at quadram.ac.uk - Homepage

Bacterial genomics & metagenomics ancient DNA sequencing & bioinformatics cloud computing bacterial protein secretion


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The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences J Parkhill, BW Wren, K Mungall, JM Ketley, C Churcher, D Basham, ... Nature 403 (6770), 665-668, 2000	2126	2000
Performance comparison of benchtop high-throughput sequencing platforms N Loman, R Misra, T Dallman, C Constantinidou, S Gharbia, J Wain, ... Nature Biotechnology, 10.1038/nbt.2198, 2012	1438	2012
A novel EspA‐associated surface organelle of enteropathogenic Escherichia coli involved in protein translocation into epithelial cells S Knutton, I Rosenshine, MJ Pallen, I Nisan, BC Neves, C Bain, C Wolff, ... The EMBO journal 17 (8), 2166-2176, 1998	635	1998
Type VI secretion: a beginner's guide LEH Bingle, CM Bailey, MJ Pallen Current opinion in microbiology 11 (1), 3-8, 2008	575	2008
Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4 H Rohde, J Qin, Y Cui, D Li, NJ Loman, M Hentschke, W Chen, F Pu, ... New England Journal of Medicine 365 (8), 718-724, 2011	496	2011
An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination T Tobe, SA Beatson, H Taniguchi, H Abe, CM Bailey, A Fivian, R Younis, ... Proceedings of the National Academy of Sciences 103 (40), 14941-14946, 2006	463	2006
The HtrA family of serine proteases MJ Pallen, BW Wren Molecular microbiology 26 (2), 209-221, 1997	463	1997
High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity NJ Loman, C Constantinidou, JZM Chan, M Halachev, M Sergeant, ... Nature Reviews Microbiology 10 (9), 599-606, 2012	458	2012
Bacterial pathogenomics MJ Pallen, BW Wren Nature 449 (7164), 835-842, 2007	430	2007
The ESAT-6/WXG100 superfamily–and a new Gram-positive secretion system? MJ Pallen Trends in microbiology 10 (5), 209-212, 2002	371	2002
The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129 AM Cerdeno‐Tarraga, A Efstratiou, LG Dover, MTG Holden, M Pallen, ... Nucleic acids research 31 (22), 6516-6523, 2003	350	2003
An embarrassment of sortases–a richness of substrates? MJ Pallen, AC Lam, M Antonio, K Dunbar Trends in microbiology 9 (3), 97-101, 2001	294	2001
A Culture-Independent Sequence-Based Metagenomics Approach to the Investigation of an Outbreak of Shiga-Toxigenic Escherichia coli O104: H4 Outbreak of Shiga-toxigenic … NJ Loman, C Constantinidou, M Christner, H Rohde, JZM Chan, J Quick, ... JAMA 309 (14), 1502-1510, 2013	263	2013
Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei SD Bentley, M Maiwald, LD Murphy, MJ Pallen, CA Yeats, LG Dover, ... The Lancet 361 (9358), 637-644, 2003	257	2003
Extensive microbial and functional diversity within the chicken cecal microbiome MJ Sergeant, C Constantinidou, TA Cogan, MR Bedford, CW Penn, ... PloS one 9 (3), e91941, 2014	248	2014
Characterization of novel LPXTG-containing proteins of Staphylococcus aureus identified from genome sequences FM Roche, R Massey, SJ Peacock, NPJ Day, L Visai, P Speziale, A Lam, ... Microbiology 149 (3), 643-654, 2003	235	2003
Twenty years of bacterial genome sequencing NJ Loman, MJ Pallen Nature Reviews Microbiology 13, 787–794, 2015	216	2015
From The Origin of Species to the origin of bacterial flagella MJ Pallen, NJ Matzke Nature Reviews Microbiology 4 (10), 784-790, 2006	215	2006
Genomic analysis of secretion systems MJ Pallen, RR Chaudhuri, IR Henderson Current opinion in microbiology 6 (5), 519-527, 2003	211	2003
Bioinformatics, genomics and evolution of non-flagellar type-III secretion systems: a Darwinian perpective MJ Pallen, SA Beatson, CM Bailey FEMS microbiology reviews 29 (2), 201-229, 2005	194	2005

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