Ramy K. Aziz
Ramy K. Aziz
Professor, Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Egypt
Verified email at pharma.cu.edu.eg - Homepage
TitleCited byYear
The RAST Server: rapid annotations using subsystems technology
RK Aziz, D Bartels, A Best, M DeJongh, T Disz, R Edwards, K Formsma, ...
BMC genomics 9 (1), 75, 2008
71762008
DNase expression allows the pathogen group A Streptococcus to escape killing in neutrophil extracellular traps
JT Buchanan, AJ Simpson, RK Aziz, GY Liu, SA Kristian, M Kotb, ...
Current biology 16 (4), 396-400, 2006
6572006
DNase Sda1 provides selection pressure for a switch to invasive group A streptococcal infection
MJ Walker, A Hollands, ML Sanderson-Smith, JN Cole, JK Kirk, ...
Nature medicine 13 (8), 981-985, 2007
3512007
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ...
Nature communications 5, 4498, 2014
3122014
Helicobacter pylori: a poor man's gut pathogen?
MM Khalifa, RR Sharaf, RK Aziz
Gut pathogens 2 (1), 2, 2010
2282010
Transposases are the most abundant, most ubiquitous genes in nature
RK Aziz, M Breitbart, RA Edwards
Nucleic acids research 38 (13), 4207-4217, 2010
2222010
Invasive M1T1 group A Streptococcus undergoes a phase‐shift in vivo to prevent proteolytic degradation of multiple virulence factors by SpeB
RK Aziz, MJ Pabst, A Jeng, R Kansal, D Low, V Nizet, M Kotb
Molecular microbiology 51 (1), 123-134, 2004
1882004
Rise and Persistence of Global M1T1 Clone of Streptococcus pyogenes
RK Aziz, M Kotb
Emerging infectious diseases 14 (10), 1511-1517, 2008
1812008
PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies
S Akhter, RK Aziz, RA Edwards
Nucleic acids research 40 (16), e126-e126, 2012
1772012
Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments
JM Monk, P Charusanti, RK Aziz, JA Lerman, N Premyodhin, JD Orth, ...
Proceedings of the National Academy of Sciences 110 (50), 20338-20343, 2013
1762013
SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models
RK Aziz, S Devoid, T Disz, RA Edwards, CS Henry, GJ Olsen, R Olson, ...
PloS one 7 (10), e48053, 2012
1202012
Mosaic prophages with horizontally acquired genes account for the emergence and diversification of the globally disseminated M1T1 clone of Streptococcus pyogenes
RK Aziz, RA Edwards, WW Taylor, DE Low, A McGeer, M Kotb
Journal of bacteriology 187 (10), 3311-3318, 2005
1182005
The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation
LK McNeil, C Reich, RK Aziz, D Bartels, M Cohoon, T Disz, RA Edwards, ...
Nucleic Acids Research 35 (suppl_1), D347-D353, 2007
1042007
Reciprocal, temporal expression of SpeA and SpeB by invasive M1T1 group A streptococcal isolates in vivo
SU Kazmi, R Kansal, RK Aziz, M Hooshdaran, A Norrby-Teglund, DE Low, ...
Infection and immunity 69 (8), 4988-4995, 2001
952001
Gut Pharmacomicrobiomics: the tip of an iceberg of complex interactions between drugs and gut-associated microbes
R Saad, MR Rizkallah, RK Aziz
Gut Pathogens 4 (1), 16, 2012
912012
Post‐proteomic identification of a novel phage‐encoded streptodornase, Sda1, in invasive M1T1 Streptococcus pyogenes
RK Aziz, SA Ismail, HW Park, M Kotb
Molecular microbiology 54 (1), 184-197, 2004
872004
Streptococcus iniae M-like protein contributes to virulence in fish and is a target for live attenuated vaccine development
JB Locke, RK Aziz, MR Vicknair, V Nizet, JT Buchanan
PLoS One 3 (7), e2824, 2008
852008
Comparative genome-scale modelling of Staphylococcus aureus strains identifies strain-specific metabolic capabilities linked to pathogenicity
E Bosi, JM Monk, RK Aziz, M Fondi, V Nizet, Bě Palsson
Proceedings of the National Academy of Sciences 113 (26), E3801-E3809, 2016
842016
Dissection of the molecular basis for hypervirulence of an in vivo-selected phenotype of the widely disseminated M1T1 strain of group A Streptococcus bacteria
RG Kansal, V Datta, RK Aziz, NF Abdeltawab, S Rowe, M Kotb
Journal of Infectious Diseases 201 (6), 855-865, 2010
782010
Contaminated water as a source of Helicobacter pylori infection
RK Aziz, MM Khalifa, RR Sharaf
Journal of Advanced Research, 2015
742015
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Articles 1–20