Ramy K. Aziz
Ramy K. Aziz
Professor, Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Egypt
Verified email at pharma.cu.edu.eg - Homepage
TitleCited byYear
The RAST Server: rapid annotations using subsystems technology
RK Aziz, D Bartels, A Best, M DeJongh, T Disz, R Edwards, K Formsma, ...
BMC genomics 9 (1), 75, 2008
DNase expression allows the pathogen group A Streptococcus to escape killing in neutrophil extracellular traps
JT Buchanan, AJ Simpson, RK Aziz, GY Liu, SA Kristian, M Kotb, ...
Current biology 16 (4), 396-400, 2006
DNase Sda1 provides selection pressure for a switch to invasive group A streptococcal infection
MJ Walker, A Hollands, ML Sanderson-Smith, JN Cole, JK Kirk, ...
Nature medicine 13 (8), 981-985, 2007
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ...
Nature communications 5, 4498, 2014
Helicobacter pylori: a poor man's gut pathogen?
MM Khalifa, RR Sharaf, RK Aziz
Gut pathogens 2 (1), 2, 2010
Transposases are the most abundant, most ubiquitous genes in nature
RK Aziz, M Breitbart, RA Edwards
Nucleic acids research 38 (13), 4207-4217, 2010
Invasive M1T1 group A Streptococcus undergoes a phase‐shift in vivo to prevent proteolytic degradation of multiple virulence factors by SpeB
RK Aziz, MJ Pabst, A Jeng, R Kansal, D Low, V Nizet, M Kotb
Molecular microbiology 51 (1), 123-134, 2004
Rise and Persistence of Global M1T1 Clone of Streptococcus pyogenes
RK Aziz, M Kotb
Emerging infectious diseases 14 (10), 1511-1517, 2008
PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies
S Akhter, RK Aziz, RA Edwards
Nucleic acids research 40 (16), e126-e126, 2012
Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments
JM Monk, P Charusanti, RK Aziz, JA Lerman, N Premyodhin, JD Orth, ...
Proceedings of the National Academy of Sciences 110 (50), 20338-20343, 2013
SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models
RK Aziz, S Devoid, T Disz, RA Edwards, CS Henry, GJ Olsen, R Olson, ...
PloS one 7 (10), e48053, 2012
Mosaic prophages with horizontally acquired genes account for the emergence and diversification of the globally disseminated M1T1 clone of Streptococcus pyogenes
RK Aziz, RA Edwards, WW Taylor, DE Low, A McGeer, M Kotb
Journal of bacteriology 187 (10), 3311-3318, 2005
The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation
LK McNeil, C Reich, RK Aziz, D Bartels, M Cohoon, T Disz, RA Edwards, ...
Nucleic Acids Research 35 (suppl_1), D347-D353, 2007
Reciprocal, temporal expression of SpeA and SpeB by invasive M1T1 group A streptococcal isolates in vivo
SU Kazmi, R Kansal, RK Aziz, M Hooshdaran, A Norrby-Teglund, DE Low, ...
Infection and immunity 69 (8), 4988-4995, 2001
Gut Pharmacomicrobiomics: the tip of an iceberg of complex interactions between drugs and gut-associated microbes
R Saad, MR Rizkallah, RK Aziz
Gut Pathogens 4 (1), 16, 2012
Post‐proteomic identification of a novel phage‐encoded streptodornase, Sda1, in invasive M1T1 Streptococcus pyogenes
RK Aziz, SA Ismail, HW Park, M Kotb
Molecular microbiology 54 (1), 184-197, 2004
Streptococcus iniae M-like protein contributes to virulence in fish and is a target for live attenuated vaccine development
JB Locke, RK Aziz, MR Vicknair, V Nizet, JT Buchanan
PLoS One 3 (7), e2824, 2008
Comparative genome-scale modelling of Staphylococcus aureus strains identifies strain-specific metabolic capabilities linked to pathogenicity
E Bosi, JM Monk, RK Aziz, M Fondi, V Nizet, Bě Palsson
Proceedings of the National Academy of Sciences 113 (26), E3801-E3809, 2016
Dissection of the molecular basis for hypervirulence of an in vivo-selected phenotype of the widely disseminated M1T1 strain of group A Streptococcus bacteria
RG Kansal, V Datta, RK Aziz, NF Abdeltawab, S Rowe, M Kotb
Journal of Infectious Diseases 201 (6), 855-865, 2010
Contaminated water as a source of Helicobacter pylori infection
RK Aziz, MM Khalifa, RR Sharaf
Journal of Advanced Research, 2015
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