Andrew Tritt
Andrew Tritt
DOE Joint Genome Institute
Verified email at lbl.gov
Title
Cited by
Cited by
Year
Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
A Kohler, A Kuo, LG Nagy, E Morin, KW Barry, F Buscot, B Canbäck, ...
Nature genetics 47 (4), 410-415, 2015
5672015
An integrated pipeline for de novo assembly of microbial genomes
A Tritt, JA Eisen, MT Facciotti, AE Darling
PloS one 7 (9), e42304, 2012
4042012
Comparative genomics of early-diverging mushroom-forming fungi provides insights into the origins of lignocellulose decay capabilities
LG Nagy, R Riley, A Tritt, C Adam, C Daum, D Floudas, H Sun, JS Yadav, ...
Molecular biology and evolution 33 (4), 959-970, 2016
1332016
Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii
D Floudas, BW Held, R Riley, LG Nagy, G Koehler, AS Ransdell, ...
Fungal Genetics and Biology 76, 78-92, 2015
1102015
‘Cis’ bound states of three localized pulses of the cubic–quintic CGL equation
H Leblond, A Komarov, M Salhi, A Haboucha, F Sanchez
Journal of Optics A: Pure and Applied Optics 8 (3), 319, 2006
100*2006
Mauve assembly metrics
AE Darling, A Tritt, JA Eisen, MT Facciotti
Bioinformatics 27 (19), 2756-2757, 2011
982011
Phylogenetically driven sequencing of extremely halophilic archaea reveals strategies for static and dynamic osmo-response
EA Becker, PM Seitzer, A Tritt, D Larsen, M Krusor, AI Yao, D Wu, ...
PLoS Genet 10 (11), e1004784, 2014
962014
Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum
M Peter, A Kohler, RA Ohm, A Kuo, J Krützmann, E Morin, M Arend, ...
Nature communications 7 (1), 1-15, 2016
782016
Strand-specific RNA-seq analyses of fruiting body development in Coprinopsis cinerea
H Muraguchi, K Umezawa, M Niikura, M Yoshida, T Kozaki, K Ishii, ...
PLoS One 10 (10), e0141586, 2015
562015
chipD: a web tool to design oligonucleotide probes for high-density tiling arrays
YS Dufour, GE Wesenberg, AJ Tritt, JD Glasner, NT Perna, JC Mitchell, ...
Nucleic acids research 38 (suppl_2), W321-W325, 2010
292010
Extreme scale de novo metagenome assembly
E Georganas, R Egan, S Hofmeyr, E Goltsman, B Arndt, A Tritt, A Buluç, ...
SC18: International Conference for High Performance Computing, Networking …, 2018
202018
101 Dothideomycetes genomes: a test case for predicting lifestyles and emergence of pathogens
S Haridas, R Albert, M Binder, J Bloem, K LaButti, A Salamov, ...
Studies in mycology 96, 141-153, 2020
172020
NWB: N 2.0: An Accessible Data Standard for Neurophysiology
O Ruebel, A Tritt, B Dichter, T Braun, N Cain, N Clack, TJ Davidson, ...
152019
Draft genome sequence of a rare smut relative, Tilletiaria anomala UBC 951
M Toome, A Kuo, B Henrissat, A Lipzen, A Tritt, Y Yoshinaga, M Zane, ...
Genome Announcements 2 (3), 2014
92014
Consortium MGI, Tunlid A, Grigoriev IV, Hibbett DS, Martin F (2015) Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
A Kohler, A Kuo, LG Nagy, E Morin, KW Barry, F Buscot, B Canbäck, ...
Nat Genet 47, 410-415, 0
8
Comparative genomics of the ectomycorrhizal sister species Rhizopogon vinicolor and Rhizopogon vesiculosus (basidiomycota: boletales) reveals a divergence of the mating type B …
AB Mujic, A Kuo, A Tritt, A Lipzen, C Chen, J Johnson, A Sharma, K Barry, ...
G3: Genes, Genomes, Genetics 7 (6), 1775-1789, 2017
62017
PyUoI: The Union of Intersections Framework in Python
PS Sachdeva, JA Livezey, AJ Tritt, KE Bouchard
Journal of Open Source Software 4 (44), 1799, 2019
22019
Genomic Analysis Enlightens Agaricales Lifestyle Evolution and Increasing Peroxidase Diversity
FJ Ruiz-Dueñas, JM Barrasa, M Sánchez-García, S Camarero, ...
Molecular Biology and Evolution, 2020
2020
HDMF: Hierarchical Data Modeling Framework for Modern Science Data Standards
AJ Tritt, O Rübel, B Dichter, R Ly, D Kang, EF Chang, LM Frank, ...
2019 IEEE International Conference on Big Data (Big Data), 165-179, 2019
2019
Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
KW Barry, F Buscot, B Canbäck, C Choi, N Cichocki, A Clum, J Colpaert, ...
Nature Genetics 4 (47), 410-U176.(2015), 2015
2015
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