Katelyn McNair
Katelyn McNair
Research Associate, San Diego State University
Verified email at mail.sdsu.edu
Title
Cited by
Cited by
Year
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ...
Nature communications 5 (1), 1-11, 2014
4612014
Lytic to temperate switching of viral communities
B Knowles, CB Silveira, BA Bailey, K Barott, VA Cantu, ...
Nature 531 (7595), 466-470, 2016
2782016
Computational approaches to predict bacteriophage–host relationships
RA Edwards, K McNair, K Faust, J Raes, BE Dutilh
FEMS microbiology reviews 40 (2), 258-272, 2016
2212016
PHACTS, a computational approach to classifying the lifestyle of phages
K McNair, BA Bailey, RA Edwards
Bioinformatics 28 (5), 614-618, 2012
1322012
Global phylogeography and ancient evolution of the widespread human gut virus crAssphage
RA Edwards, AA Vega, HM Norman, M Ohaeri, K Levi, EA Dinsdale, ...
Nature microbiology 4 (10), 1727-1736, 2019
762019
Multivariate analysis of functional metagenomes
EA Dinsdale, RA Edwards, B Bailey, I Tuba, S Akhter, K McNair, ...
Frontiers in genetics 4, 41, 2013
602013
PHANOTATE: a novel approach to gene identification in phage genomes
K McNair, C Zhou, EA Dinsdale, B Souza, RA Edwards
Bioinformatics 35 (22), 4537-4542, 2019
432019
Phage genome annotation using the RAST pipeline
K McNair, RK Aziz, GD Pusch, R Overbeek, BE Dutilh, R Edwards
Bacteriophages, 231-238, 2018
322018
multiPhATE: bioinformatics pipeline for functional annotation of phage isolates
CL Ecale Zhou, S Malfatti, J Kimbrel, C Philipson, K McNair, T Hamilton, ...
Bioinformatics 35 (21), 4402-4404, 2019
232019
A diversity-generating retroelement encoded by a globally ubiquitous Bacteroides phage
S Benler, AG Cobián-Güemes, K McNair, SH Hung, K Levi, R Edwards, ...
Microbiome 6 (1), 1-10, 2018
232018
Prophage genomics reveals patterns in phage genome organization and replication
HS Kang, K McNair, DA Cuevas, BA Bailey, AM Segall, RA Edwards
BioRxiv, 114819, 2017
192017
Draft genome sequence of the fish pathogen Piscirickettsia salmonis
M Eppinger, K McNair, X Zogaj, EA Dinsdale, RA Edwards, KE Klose
Genome announcements 1 (6), 2013
182013
Dietary prophage inducers and antimicrobials: toward landscaping the human gut microbiome
L Boling, DA Cuevas, JA Grasis, HS Kang, B Knowles, K Levi, H Maughan, ...
Gut microbes 11 (4), 721-734, 2020
162020
PARTIE: a partition engine to separate metagenomic and amplicon projects in the Sequence Read Archive
PJ Torres, RA Edwards, KA McNair
Bioinformatics 33 (15), 2389-2391, 2017
162017
GenomePeek—an online tool for prokaryotic genome and metagenome analysis
K McNair, RA Edwards
PeerJ 3, e1025, 2015
132015
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes. Nat Commun 5: 4498
BE Dutilh, N Cassman, K McNair, SE Sanchez, GG Silva, L Boling, JJ Barr, ...
132014
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes. Nat Commun. 2014; 5: 4498
BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ...
11
GenomePeek—an online tool for prokaryotic genome and metagenome analysis. PeerJ 3: e1025
K McNair, RA Edwards
62015
THEA: a novel approach to gene identification in phage genomes
K McNair, C Zhou, B Souza, RA Edwards
BioRxiv, 265983, 2018
42018
Utilizing Amino Acid Composition and Entropy of Potential Open Reading Frames to Identify Protein-Coding Genes
K McNair, CL Ecale Zhou, B Souza, S Malfatti, RA Edwards
Microorganisms 9 (1), 129, 2021
12021
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Articles 1–20