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Yangyang Hao
Yangyang Hao
PhD of Medical & Molecular Genetics, Indiana University; Veracyte Inc SSF
Verified email at iupui.edu
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Cited by
Cited by
Year
miR2Disease: a manually curated database for microRNA deregulation in human disease
Q Jiang, Y Wang, Y Hao, L Juan, M Teng, X Zhang, M Li, G Wang, Y Liu
Nucleic acids research 37 (suppl_1), D98-D104, 2009
15742009
Prioritization of disease microRNAs through a human phenome-microRNAome network
Q Jiang, Y Hao, G Wang, L Juan, T Zhang, M Teng, Y Liu, Y Wang
BMC systems biology 4, 1-9, 2010
3832010
Analytical and clinical validation of expressed variants and fusions from the whole transcriptome of thyroid FNA samples
TE Angell, LJ Wirth, ME Cabanillas, ML Shindo, ES Cibas, JE Babiarz, ...
Frontiers in endocrinology 10, 612, 2019
492019
Afirma Genomic Sequencing Classifier and Xpression Atlas molecular findings in consecutive Bethesda III-VI thyroid nodules
MI Hu, SG Waguespack, C Dosiou, PW Ladenson, MJ Livhits, LJ Wirth, ...
The Journal of Clinical Endocrinology & Metabolism 106 (8), 2198-2207, 2021
462021
Impact of human pathogenic micro-insertions and micro-deletions on post-transcriptional regulation
X Zhang, H Lin, H Zhao, Y Hao, M Mort, DN Cooper, Y Zhou, Y Liu
Human molecular genetics 23 (11), 3024-3034, 2014
362014
Improving alignment accuracy on homopolymer regions for semiconductor-based sequencing technologies
W Feng, S Zhao, D Xue, F Song, Z Li, D Chen, B He, Y Hao, Y Wang, ...
BMC genomics 17, 87-93, 2016
332016
Tissue-specific co-expression of long non-coding and coding RNAs associated with breast cancer
W Wu, EK Wagner, Y Hao, X Rao, H Dai, J Han, J Chen, AMV Storniolo, ...
Scientific reports 6 (1), 32731, 2016
302016
Alt Event Finder: a tool for extracting alternative splicing events from RNA-seq data
A Zhou, MR Breese, Y Hao, HJ Edenberg, L Li, TC Skaar, Y Liu
BMC genomics 13, 1-10, 2012
292012
Identification of Hürthle cell cancers: solving a clinical challenge with genomic sequencing and a trio of machine learning algorithms
Y Hao, QY Duh, RT Kloos, J Babiarz, RM Harrell, ST Traweek, SY Kim, ...
BMC Systems Biology 13 (Suppl 2), 27, 2019
282019
Dependence receptor UNC5A restricts luminal to basal breast cancer plasticity and metastasis
SPHN Maria B. Padua, Poornima Bhat-Nakshatri, Manjushree Anjanappa, Mayuri S ...
Breast Cancer Research 35, 2018
25*2018
A system for detecting high impact-low frequency mutations in primary tumors and metastases
M Anjanappa*, Y Hao*, ER Simpson Jr., P Bhat-Nakshatri, JB Nelson, ...
Oncogene, 2017
252017
Weighted network-based inference of human microrna-disease associations
Q Jiang, Y Hao, G Wang, T Zhang, Y Wang
2010 Fifth International Conference on Frontier of Computer Science and …, 2010
222010
Analytical verification performance of afirma genomic sequencing classifier in the diagnosis of cytologically indeterminate thyroid nodules
Y Hao, Y Choi, JE Babiarz, RT Kloos, GC Kennedy, J Huang, PS Walsh
Frontiers in endocrinology 10, 438, 2019
202019
Real-world performance of the Afirma Genomic Sequencing Classifier (GSC)—a meta-analysis
CE Nasr, M Andrioli, M Endo, RM Harrell, MJ Livhits, I Osakwe, ...
The Journal of Clinical Endocrinology & Metabolism 108 (6), 1526-1532, 2023
172023
Improving Lung Cancer Risk Stratification Leveraging Whole Transcriptome RNA Sequencing and Machine Learning across Multiple Cohorts
Y Choi*, J Qu*, S Wu, Y Hao, J Zhang, J Ning, XI Yang, L Lofaro, ...
APBC 2020 (The 18th Asia Pacific Bioinformatics Conference), 2020
162020
Preoperative identification of medullary thyroid carcinoma (MTC): clinical validation of the Afirma MTC RNA-sequencing classifier
GW Randolph, JA Sosa, Y Hao, TE Angell, DC Shonka, VA LiVolsi, ...
Thyroid 32 (9), 1069-1076, 2022
122022
PASSPORT-seq: a novel high-throughput bioassay to functionally test polymorphisms in micro-RNA target sites
J Ipe, KS Collins, Y Hao, H Gao, P Bhatia, A Gaedigk, Y Liu, TC Skaar
Frontiers in genetics 9, 219, 2018
122018
RareVar: a Framework for Detecting Low Frequency Single Nucleotide Variants
Y Hao, XX Xuei, L Li, N Harikrishna, H Edenberg, Y Liu
Journal of Computational Biology 24, 2017
92017
Statistical modeling for sensitive detection of low-frequency single nucleotide variants
Y Hao, P Zhang, X Xuei, H Nakshatri, HJ Edenberg, L Li, Y Liu
BMC genomics 17, 217-226, 2016
52016
Breast heterogeneity: obstacles to developing universal biomarkers of breast cancer initiation and progression
RC Dirks, HN Burney, M Anjanappa, GE Sandusky, Y Hao, Y Liu, ...
Journal of the American College of Surgeons 231 (1), 85-96, 2020
32020
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Articles 1–20