Cheong Xin Chan

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Mark A. RaganInstitute for Molecular Bioscience, The University of QueenslandVerified email at uq.edu.au
Debashish BhattacharyaProfessor of Biochemistry and Microbiology, Rutgers UniversityVerified email at rutgers.edu
Rob BeikoAssociate Professor of Computer Science, Dalhousie UniversityVerified email at dal.ca
Hwan Su YoonSungkyunkwan UniversityVerified email at skku.edu
Guillaume BernardPostdoctoral Fellow, Evolution Paris Seine, Université Pierre et Marie CurieVerified email at upmc.fr
Dana C. PriceAssociate Research ProfessorVerified email at rutgers.edu
Andreas P.M. WeberProfessor of Plant Biochemistry, Heinrich-Heine-University DüsseldorfVerified email at hhu.de
Aaron DarlingProfessor of computational (meta)genomics, University of Technology SydneyVerified email at uts.edu.au
Nic BlouinUniversity of WyomingVerified email at uwyo.edu
Senjie LinProfessor of Biological Oceanography, University of ConnecticutVerified email at uconn.edu
Lim Phaik-EemSenior Lecturer, University of MalayaVerified email at um.edu.my
Jeferson GrossSão Paulo State University (UNESP)Verified email at ipben.unesp.br
Christoph BenningProfessor of Biochemistry and Molecular Biology, Michigan State UniversityVerified email at msu.edu
Maria Cecilia AriasMaitre de Conferences, USTLVerified email at univ-lille1.fr
Bernard HenrissatKing Abdulaziz University, Jeddah / CNRS MarseilleVerified email at univ-amu.fr
Frederique Hilliouresearch engineer INRA Sophia AntipolisVerified email at sophia.inra.fr
Pedro M. CoutinhoProfessor, Université d'Aix-Marseille, FranceVerified email at afmb.univ-mrs.fr
John W. StillerEast Carolina UniversityVerified email at ecu.edu
Rofina Yasmin OthmanProfessor, University of MalayaVerified email at um.edu.my
Adrian Reyes-PrietoAssociate Professor. Biology Department, University of New Brunswick and Canadian Institute forVerified email at unb.ca

Cheong Xin Chan

Australian Centre for Ecogenomics, Sch. Chemistry & Molecular Biosciences, University of

Verified email at uq.edu.au - Homepage

Genomics Computational Biology Molecular Evolution Phylogenomics Evolutionary genomics


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Cyanophora paradoxa genome elucidates origin of photosynthesis in algae and plants DC Price, CX Chan, HS Yoon, EC Yang, H Qiu, APM Weber, R Schwacke, ... Science 335 (6070), 843-847, 2012	362	2012
Genome of the red alga Porphyridium purpureum D Bhattacharya, DC Price, CX Chan, H Qiu, N Rose, S Ball, APM Weber, ... Nature Communications 4, 1941, 2013	182	2013
Next-generation phylogenomics CX Chan, MA Ragan Biology Direct 8, 3, 2013	149	2013
Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta) SH Brawley, NA Blouin, E Ficko-Blean, GL Wheeler, M Lohr, HV Goodson, ... Proceedings of the National Academy of Sciences 114 (31), E6361-E6370, 2017	114	2017
Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes CX Chan, EC Yang, T Banerjee, HS Yoon, PT Martone, JM Estevez, ... Current Biology 21 (4), 328-333, 2011	102	2011
Trends in seaweed research CX Chan, CL Ho, SM Phang Trends in Plant Science 11 (4), 165-166, 2006	87	2006
Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis H Liu, TG Stephens, RA González-Pech, VH Beltran, B Lapeyre, ... Communications Biology 1, 95, 2018	74*	2018
A new species of Burkholderia isolated from sugarcane roots promotes plant growth C Paungfoo‐Lonhienne, TGA Lonhienne, YK Yeoh, RI Webb, ... Microbial Biotechnology 7 (2), 142-154, 2014	74	2014
The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome AR Mohamed, V Cumbo, S Harii, C Shinzato, CX Chan, MA Ragan, ... Molecular Ecology 25 (13), 3127–3141, 2016	73	2016
Optimisation of RNA extraction from Gracilaria changii (Gracilariales, Rhodophyta) CX Chan, SS Teo, CL Ho, RY Othman, SM Phang Journal of Applied Phycology 16 (4), 297-301, 2004	70	2004
Benchmarking of alignment-free sequence comparison methods A Zielezinski, HZ Girgis, G Bernard, CA Leimeister, K Tang, T Dencker, ... Genome Biology 20, 144, 2019	67	2019
Inferring phylogenies of evolving sequences without multiple sequence alignment CX Chan, G Bernard, O Poirion, JM Hogan, MA Ragan Scientific Reports 4, 6504, 2014	63	2014
Lateral transfer of genes and gene fragments in Staphylococcus extends beyond mobile elements CX Chan, RG Beiko, MA Ragan Journal of Bacteriology 193 (15), 3964-3977, 2011	63	2011
Are protein domains modules of lateral genetic transfer? CX Chan, AE Darling, RG Beiko, MA Ragan PLoS One 4 (2), e4524, 2009	61	2009
Porphyra (Bangiophyceae) Transcriptomes Provide Insights Into Red Algal Development And Metabolism CX Chan, NA Blouin, Y Zhuang, S Zäuner, SE Prochnik, E Lindquist, S Lin, ... Journal of Phycology 48 (6), 1328-1342, 2012	60	2012
Lateral transfer of genes and gene fragments in prokaryotes CX Chan, RG Beiko, AE Darling, MA Ragan Genome Biology and Evolution 1, 429-438, 2009	60	2009
Plastid origin and evolution: new models provide insights into old problems CX Chan, J Gross, HS Yoon, D Bhattacharya Plant Physiology 155 (4), 1552-1560, 2011	57	2011
The algal revolution J Brodie, CX Chan, O De Clerck, JM Cock, SM Coelho, C Gachon, ... Trends in Plant Science 22 (8), 726-738, 2017	54	2017
The ReFuGe 2020 Consortium—using “omics” approaches to explore the adaptability and resilience of coral holobionts to environmental change CR Voolstra, DJ Miller, MA Ragan, A Hoffmann, O Hoegh-Guldberg, ... Frontiers in Marine Science 2, 68, 2015	53	2015
Detecting recombination in evolving nucleotide sequences CX Chan, RG Beiko, MA Ragan BMC Bioinformatics 7 (1), 412, 2006	52	2006

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