Cheong Xin Chan

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Mark A. RaganInstitute for Molecular Bioscience, The University of QueenslandVerified email at uq.edu.au
Debashish BhattacharyaProfessor of Biochemistry and Microbiology, Rutgers UniversityVerified email at rutgers.edu
Rob BeikoAssociate Professor of Computer Science, Dalhousie UniversityVerified email at dal.ca
Guillaume BernardPostdoctoral Fellow, Institut de Biologie de L’Ecole Normale Supérieure (IBENS)Verified email at bio.ens.psl.eu
Hwan Su YoonSungkyunkwan UniversityVerified email at skku.edu
Dana C. PriceAssociate Research ProfessorVerified email at rutgers.edu
Andreas P.M. WeberProfessor of Plant Biochemistry, Heinrich-Heine-University DüsseldorfVerified email at hhu.de
Jeferson GrossSão Paulo State University (UNESP)Verified email at unesp.br
Aaron DarlingIllumina Australia; Professor @ University of Technology SydneyVerified email at illumina.com
Nic BlouinUniversity of WyomingVerified email at uwyo.edu
Senjie LinProfessor of Biological Oceanography, University of ConnecticutVerified email at uconn.edu
Lim Phaik-EemProfessor, University of MalayaVerified email at um.edu.my
Patrick MartoneProfessor of Botany, University of British ColumbiaVerified email at mail.ubc.ca
Christoph BenningProfessor of Biochemistry and Molecular Biology, Michigan State UniversityVerified email at msu.edu
Maria Cecilia AriasMaitre de Conferences, USTLVerified email at univ-lille1.fr
Bernard HenrissatTechnical University of Denmark / King Abdulaziz University / CNRS MarseilleVerified email at univ-amu.fr
Frederique Hilliouresearch engineer INRAE Sophia AntipolisVerified email at inrae.fr
Pedro M. CoutinhoProfessor, Université d'Aix-Marseille, FranceVerified email at afmb.univ-mrs.fr
John W. StillerEast Carolina UniversityVerified email at ecu.edu
Rofina Yasmin OthmanProfessor, University of MalayaVerified email at um.edu.my

Cheong Xin Chan

Australian Centre for Ecogenomics, Sch. Chemistry & Molecular Biosciences, University of

Verified email at uq.edu.au - Homepage

Algal genomics Algal evolution Computational biology Evolutionary genomics


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Cyanophora paradoxa genome elucidates origin of photosynthesis in algae and plants DC Price, CX Chan, HS Yoon, EC Yang, H Qiu, APM Weber, R Schwacke, ... Science 335 (6070), 843-847, 2012	393	2012
Genome of the red alga Porphyridium purpureum D Bhattacharya, DC Price, CX Chan, H Qiu, N Rose, S Ball, APM Weber, ... Nature Communications 4, 1941, 2013	220	2013
Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta) SH Brawley, NA Blouin, E Ficko-Blean, GL Wheeler, M Lohr, HV Goodson, ... Proceedings of the National Academy of Sciences 114 (31), E6361-E6370, 2017	177	2017
Next-generation phylogenomics CX Chan, MA Ragan Biology Direct 8, 3, 2013	172	2013
Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis H Liu, TG Stephens, RA González-Pech, VH Beltran, B Lapeyre, ... Communications Biology 1, 95, 2018	129	2018
Benchmarking of alignment-free sequence comparison methods A Zielezinski, HZ Girgis, G Bernard, CA Leimeister, K Tang, T Dencker, ... Genome Biology 20, 144, 2019	127	2019
A genomic view of the reef-building coral Porites lutea and its microbial symbionts SJ Robbins, CM Singleton, CX Chan, LF Messer, AU Geers, H Ying, ... Nature Microbiology 4, 2090-2100, 2019	115	2019
Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes CX Chan, EC Yang, T Banerjee, HS Yoon, PT Martone, JM Estevez, ... Current Biology 21 (4), 328-333, 2011	110	2011
Trends in seaweed research CX Chan, CL Ho, SM Phang Trends in Plant Science 11 (4), 165-166, 2006	97	2006
The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome AR Mohamed, V Cumbo, S Harii, C Shinzato, CX Chan, MA Ragan, ... Molecular Ecology 25 (13), 3127–3141, 2016	91	2016
A new species of Burkholderia isolated from sugarcane roots promotes plant growth C Paungfoo‐Lonhienne, TGA Lonhienne, YK Yeoh, RI Webb, ... Microbial Biotechnology 7 (2), 142-154, 2014	89	2014
The algal revolution J Brodie, CX Chan, O De Clerck, JM Cock, SM Coelho, C Gachon, ... Trends in Plant Science 22 (8), 726-738, 2017	77	2017
Optimisation of RNA extraction from Gracilaria changii (Gracilariales, Rhodophyta) CX Chan, SS Teo, CL Ho, RY Othman, SM Phang Journal of Applied Phycology 16 (4), 297-301, 2004	77	2004
Inferring phylogenies of evolving sequences without multiple sequence alignment CX Chan, G Bernard, O Poirion, JM Hogan, MA Ragan Scientific Reports 4, 6504, 2014	74	2014
Lateral transfer of genes and gene fragments in Staphylococcus extends beyond mobile elements CX Chan, RG Beiko, MA Ragan Journal of Bacteriology 193 (15), 3964-3977, 2011	74	2011
The ReFuGe 2020 Consortium—using “omics” approaches to explore the adaptability and resilience of coral holobionts to environmental change CR Voolstra, DJ Miller, MA Ragan, A Hoffmann, O Hoegh-Guldberg, ... Frontiers in Marine Science, 68, 2015	73	2015
Are protein domains modules of lateral genetic transfer? CX Chan, AE Darling, RG Beiko, MA Ragan PLoS One 4 (2), e4524, 2009	69	2009
Porphyra (Bangiophyceae) Transcriptomes Provide Insights Into Red Algal Development And Metabolism CX Chan, NA Blouin, Y Zhuang, S Zäuner, SE Prochnik, E Lindquist, S Lin, ... Journal of Phycology 48 (6), 1328-1342, 2012	67	2012
Lateral transfer of genes and gene fragments in prokaryotes CX Chan, RG Beiko, AE Darling, MA Ragan Genome Biology and Evolution 1, 429-438, 2009	65	2009
Alignment-free inference of hierarchicaal and reticulate phylogenomic relationships G Bernard, CX Chan, Y Chan, XY Chua, Y Cong, JM Hogan, ... Briefings in Bioinformatics 20 (2), 426-435, 2019	57	2019

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