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Lei Shi
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Macromolecular modeling and design in Rosetta: recent methods and frameworks
JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ...
Nature methods 17 (7), 665-680, 2020
5682020
NMR structure of the cathelicidin-derived human antimicrobial peptide LL-37 in dodecylphosphocholine micelles
F Porcelli, R Verardi, L Shi, KA Henzler-Wildman, A Ramamoorthy, ...
Biochemistry 47 (20), 5565-5572, 2008
2102008
Structure and topology of monomeric phospholamban in lipid membranes determined by a hybrid solution and solid-state NMR approach
NJ Traaseth, L Shi, R Verardi, DG Mullen, G Barany, G Veglia
Proceedings of the National Academy of Sciences 106 (25), 10165-10170, 2009
1992009
Structural topology of phospholamban pentamer in lipid bilayers by a hybrid solution and solid-state NMR method
R Verardi, L Shi, NJ Traaseth, N Walsh, G Veglia
Proceedings of the National Academy of Sciences 108 (22), 9101-9106, 2011
1852011
Structural and Dynamic Basis of Phospholamban and Sarcolipin Inhibition of Ca2+-ATPase
NJ Traaseth, KN Ha, R Verardi, L Shi, JJ Buffy, LR Masterson, G Veglia
Biochemistry 47 (1), 3-13, 2008
1632008
Dynamically committed, uncommitted, and quenched states encoded in protein kinase A revealed by NMR spectroscopy
LR Masterson, L Shi, E Metcalfe, J Gao, SS Taylor, G Veglia
Proceedings of the National Academy of Sciences 108 (17), 6969-6974, 2011
1562011
Intrinsic disorder drives N-terminal ubiquitination by Ube2w
V Vittal, L Shi, DM Wenzel, KM Scaglione, ED Duncan, V Basrur, ...
Nature chemical biology 11 (1), 83-89, 2015
772015
cAMP-dependent protein kinase A selects the excited state of the membrane substrate phospholamban
LR Masterson, T Yu, L Shi, Y Wang, M Gustavsson, MM Mueller, G Veglia
Journal of molecular biology 412 (2), 155-164, 2011
762011
Structure and dynamics of a primordial catalytic fold generated by in vitro evolution
FA Chao, A Morelli, JCH Iii, L Churchfield, LN Hagmann, L Shi, ...
Nature chemical biology 9 (2), 81-83, 2013
712013
A conserved histidine modulates HSPB5 structure to trigger chaperone activity in response to stress-related acidosis
P Rajagopal, E Tse, AJ Borst, SP Delbecq, L Shi, DR Southworth, ...
elife 4, e07304, 2015
642015
A refinement protocol to determine structure, topology, and depth of insertion of membrane proteins using hybrid solution and solid-state NMR restraints
L Shi, NJ Traaseth, R Verardi, A Cembran, J Gao, G Veglia
Journal of biomolecular NMR 44, 195-205, 2009
612009
Dysfunctional conformational dynamics of protein kinase A induced by a lethal mutant of phospholamban hinder phosphorylation
J Kim, LR Masterson, A Cembran, R Verardi, L Shi, J Gao, SS Taylor, ...
Proceedings of the National Academy of Sciences 112 (12), 3716-3721, 2015
512015
Structure of the α-crystallin domain from the redox-sensitive chaperone, HSPB1
P Rajagopal, Y Liu, L Shi, AF Clouser, RE Klevit
Journal of biomolecular NMR 63, 223-228, 2015
492015
Allostery and binding cooperativity of the catalytic subunit of protein kinase A by NMR spectroscopy and molecular dynamics simulations
LR Masterson, A Cembran, L Shi, G Veglia
Advances in protein chemistry and structural biology 87, 363-389, 2012
482012
Tilt and azimuthal angles of a transmembrane peptide: a comparison between molecular dynamics calculations and solid-state NMR data of sarcolipin in lipid membranes
L Shi, A Cembran, J Gao, G Veglia
Biophysical journal 96 (9), 3648-3662, 2009
482009
Paramagnetic-based NMR restraints lift residual dipolar coupling degeneracy in multidomain detergent-solubilized membrane proteins
L Shi, NJ Traaseth, R Verardi, M Gustavsson, J Gao, G Veglia
Journal of the American Chemical Society 133 (7), 2232-2241, 2011
432011
Probing membrane topology of the antimicrobial peptide distinctin by solid-state NMR spectroscopy in zwitterionic and charged lipid bilayers
R Verardi, NJ Traaseth, L Shi, F Porcelli, L Monfregola, S De Luca, ...
Biochimica et Biophysica Acta (BBA)-Biomembranes 1808 (1), 34-40, 2011
392011
A hybrid NMR/SAXS‐based approach for discriminating oligomeric protein interfaces using R osetta
P Rossi, L Shi, G Liu, CM Barbieri, HW Lee, TD Grant, JR Luft, R Xiao, ...
Proteins: Structure, Function, and Bioinformatics 83 (2), 309-317, 2015
382015
Structures of the excited states of phospholamban and shifts in their populations upon phosphorylation
A De Simone, M Gustavsson, RW Montalvao, L Shi, G Veglia, ...
Biochemistry 52 (38), 6684-6694, 2013
342013
FLAMEnGO: a fuzzy logic approach for methyl group assignment using NOESY and paramagnetic relaxation enhancement data
FA Chao, L Shi, LR Masterson, G Veglia
Journal of Magnetic Resonance 214, 103-110, 2012
332012
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Articles 1–20