| Multicellular transcriptional analysis of mammalian heart regeneration GA Quaife-Ryan, CB Sim, M Ziemann, A Kaspi, H Rafehi, M Ramialison, ... Circulation 136 (12), 1123-1139, 2017 | 253 | 2017 |
| Genome-wide analysis distinguishes hyperglycemia regulated epigenetic signatures of primary vascular cells L Pirola, A Balcerczyk, RW Tothill, I Haviv, A Kaspi, S Lunke, M Ziemann, ... Genome research 21 (10), 1601-1615, 2011 | 249 | 2011 |
| Deep sequencing reveals increased DNA methylation in chronic rat epilepsy K Kobow, A Kaspi, KN Harikrishnan, K Kiese, M Ziemann, I Khurana, ... Acta neuropathologica 126, 741-756, 2013 | 211 | 2013 |
| Hepatitis C virus leaves an epigenetic signature post cure of infection by direct-acting antivirals S Perez, A Kaspi, T Domovitz, A Davidovich, A Lavi-Itzkovitz, T Meirson, ... PLoS genetics 15 (6), e1008181, 2019 | 144 | 2019 |
| Epigenetic regulation of cell type–specific expression patterns in the human mammary epithelium R Maruyama, S Choudhury, A Kowalczyk, M Bessarabova, ... PLoS genetics 7 (4), e1001369, 2011 | 130 | 2011 |
| Molecular profiling of human mammary gland links breast cancer risk to a p27+ cell population with progenitor characteristics S Choudhury, V Almendro, VF Merino, Z Wu, R Maruyama, Y Su, ... Cell stem cell 13 (1), 117-130, 2013 | 110 | 2013 |
| Etiology matters–genomic DNA methylation patterns in three rat models of acquired epilepsy KJ Dębski, A Pitkanen, N Puhakka, AM Bot, I Khurana, KN Harikrishnan, ... Scientific reports 6 (1), 25668, 2016 | 101 | 2016 |
| Vascular histone deacetylation by pharmacological HDAC inhibition H Rafehi, A Balcerczyk, S Lunke, A Kaspi, M Ziemann, KN Harikrishnan, ... Genome research 24 (8), 1271-1284, 2014 | 92 | 2014 |
| Genomic DNA methylation distinguishes subtypes of human focal cortical dysplasia K Kobow, M Ziemann, H Kaipananickal, I Khurana, A Mühlebner, ... Epilepsia 60 (6), 1091-1103, 2019 | 82 | 2019 |
| Dynamic changes in the cardiac methylome during postnatal development CB Sim, M Ziemann, A Kaspi, KN Harikrishnan, J Ooi, I Khurana, L Chang, ... The FASEB Journal 29 (4), 1329-1343, 2015 | 75 | 2015 |
| Evaluation of microRNA alignment techniques M Ziemann, A Kaspi, A El-Osta Rna 22 (8), 1120-1138, 2016 | 68 | 2016 |
| Lipoxins regulate the early growth response–1 network and reverse diabetic kidney disease EP Brennan, M Mohan, A McClelland, C Tikellis, M Ziemann, A Kaspi, ... Journal of the American Society of Nephrology 29 (5), 1437-1448, 2018 | 60 | 2018 |
| Sex-specific control of human heart maturation by the progesterone receptor CB Sim, B Phipson, M Ziemann, H Rafehi, RJ Mills, KI Watt, ... Circulation 143 (16), 1614-1628, 2021 | 56 | 2021 |
| Digital expression explorer 2: a repository of uniformly processed RNA sequencing data M Ziemann, A Kaspi, A El-Osta Gigascience 8 (4), giz022, 2019 | 54 | 2019 |
| Mitch: Multi-contrast pathway enrichment for multi-omics and single-cell profiling data A Kaspi, M Ziemann BMC genomics 21, 1-17, 2020 | 45 | 2020 |
| Combining target enrichment with barcode multiplexing for high throughput SNP discovery N Cummings, R King, A Rickers, A Kaspi, S Lunke, I Haviv, JBM Jowett BMC genomics 11, 1-8, 2010 | 41 | 2010 |
| Transcription factors Tp73, Cebpd, Pax6, and Spi1 rather than DNA methylation regulate chronic transcriptomics changes after experimental traumatic brain injury A Lipponen, A El-Osta, A Kaspi, M Ziemann, I Khurana, H Kn, ... Acta Neuropathologica Communications 6, 1-16, 2018 | 35 | 2018 |
| Infanticide vs. inherited cardiac arrhythmias M Brohus, T Arsov, DA Wallace, HH Jensen, M Nyegaard, L Crotti, ... EP Europace 23 (3), 441-450, 2021 | 33 | 2021 |
| Genetic aetiologies for childhood speech disorder: novel pathways co-expressed during brain development A Kaspi, MS Hildebrand, VE Jackson, R Braden, O Van Reyk, T Howell, ... Molecular psychiatry 28 (4), 1647-1663, 2023 | 31 | 2023 |
| DNA methylation patterns from peripheral blood separate coronary artery disease patients with and without heart failure CR Bain, M Ziemann, A Kaspi, AW Khan, R Taylor, H Trahair, I Khurana, ... ESC heart failure 7 (5), 2468-2478, 2020 | 30 | 2020 |
