|The Amphimedon queenslandica genome and the evolution of animal complexity|
M Srivastava, O Simakov, J Chapman, B Fahey, MEA Gauthier, T Mitros, ...
Nature 466 (7307), 720-726, 2010
|The origins of novel protein interactions during animal opsin evolution|
DC Plachetzki, BM Degnan, TH Oakley
PloS one 2 (10), e1054, 2007
|Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa|
ML Borowiec, EK Lee, JC Chiu, DC Plachetzki
BMC genomics 16 (1), 1-15, 2015
|Comparative validation of the D. melanogaster modENCODE transcriptome annotation|
ZX Chen, D Sturgill, J Qu, H Jiang, S Park, N Boley, AM Suzuki, ...
Genome research 24 (7), 1209-1223, 2014
|Recruitment of rod photoreceptors from short-wavelength-sensitive cones during the evolution of nocturnal vision in mammals|
JW Kim, HJ Yang, AP Oel, MJ Brooks, L Jia, DC Plachetzki, W Li, ...
Developmental cell 37 (6), 520-532, 2016
|The evolution of phototransduction from an ancestral cyclic nucleotide gated pathway|
DC Plachetzki, CR Fong, TH Oakley
Proceedings of the Royal Society B: Biological Sciences 277 (1690), 1963-1969, 2010
|Blue-light-receptive cryptochrome is expressed in a sponge eye lacking neurons and opsin|
AS Rivera, N Ozturk, B Fahey, DC Plachetzki, BM Degnan, A Sancar, ...
Journal of Experimental Biology 215 (8), 1278-1286, 2012
|A critical appraisal of the use of microRNA data in phylogenetics|
RC Thomson, DC Plachetzki, DL Mahler, BR Moore
Proceedings of the national academy of sciences 111 (35), E3659-E3668, 2014
|Cnidocyte discharge is regulated by light and opsin-mediated phototransduction|
DC Plachetzki, CR Fong, TH Oakley
BMC biology 10 (1), 1-10, 2012
|Phylogenomics provides a robust topology of the major cnidarian lineages and insights on the origins of key organismal traits|
E Kayal, B Bentlage, MS Pankey, AH Ohdera, M Medina, DC Plachetzki, ...
BMC evolutionary biology 18 (1), 68, 2018
|Key transitions during the evolution of animal phototransduction: novelty,“tree-thinking,” co-option, and co-duplication|
DC Plachetzki, TH Oakley
Integrative and Comparative Biology 47 (5), 759-769, 2007
|Gene duplication and the origins of morphological complexity in pancrustacean eyes, a genomic approach|
AS Rivera, MS Pankey, DC Plachetzki, C Villacorta, AE Syme, JM Serb, ...
BMC evolutionary biology 10 (1), 123, 2010
|New insights into the evolutionary history of photoreceptor cells|
DC Plachetzki, JM Serb, TH Oakley
Trends in ecology & evolution 20 (9), 465-467, 2005
|The importance of tissue specificity for RNA-seq: highlighting the errors of composite structure extractions|
BR Johnson, J Atallah, DC Plachetzki
BMC genomics 14 (1), 1-8, 2013
|Pan-metazoan phylogeny of the DMRT gene family: a framework for functional studies|
JR Wexler, DC Plachetzki, A Kopp
Development genes and evolution 224 (3), 175-181, 2014
|Isolation and expression of Pax6 and atonal homologues in the American horseshoe crab, Limulus polyphemus|
DC Blackburn, KW Conley, DC Plachetzki, K Kempler, BA Battelle, ...
Developmental dynamics: an official publication of the American Association …, 2008
|Furcation, field-splitting, and the evolutionary origins of novelty in arthropod photoreceptors|
TH Oakley, DC Plachetzki, AS Rivera
Arthropod structure & development 36 (4), 386-400, 2007
|Adaptation to heat stress reduces phenotypic and transcriptional plasticity in a marine copepod|
MW Kelly, MS Pankey, MB DeBiasse, DC Plachetzki
Functional Ecology 31 (2), 398-406, 2017
|Ancient origins of metazoan gonadotropin-releasing hormone and their receptors revealed by phylogenomic analyses|
DC Plachetzki, PS Tsai, SI Kavanaugh, SA Sower
General and comparative endocrinology 234, 10-19, 2016
|Prolific origination of eyes in Cnidaria with co-option of non-visual opsins|
N Picciani, JR Kerlin, N Sierra, AJM Swafford, MD Ramirez, NG Roberts, ...
Current Biology 28 (15), 2413-2419. e4, 2018