Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis RA Bull, TN Adikari, JM Ferguson, JM Hammond, I Stevanovski, ... Nature communications 11 (1), 6272, 2020 | 257 | 2020 |
Reference standards for next-generation sequencing SA Hardwick, IW Deveson, TR Mercer Nature Reviews Genetics 18 (8), 473-484, 2017 | 233 | 2017 |
The dimensions, dynamics, and relevance of the mammalian noncoding transcriptome IW Deveson, SA Hardwick, TR Mercer, JS Mattick Trends in Genetics 33 (7), 464-478, 2017 | 211 | 2017 |
Tracking the international spread of SARS-CoV-2 lineages B. 1.1. 7 and B. 1.351/501Y-V2 with grinch Á O'Toole, V Hill, OG Pybus, A Watts, II Bogoch, K Khan, JP Messina, ... Wellcome Open Research 6, 2021 | 190 | 2021 |
Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology IW Deveson, B Gong, K Lai, JS LoCoco, TA Richmond, J Schageman, ... Nature biotechnology 39 (9), 1115-1128, 2021 | 179 | 2021 |
Diagnosis of fusion genes using targeted RNA sequencing EE Heyer, IW Deveson, D Wooi, CI Selinger, RJ Lyons, VM Hayes, ... Nature communications 10 (1), 1-12, 2019 | 167 | 2019 |
Universal alternative splicing of noncoding exons IW Deveson, ME Brunck, J Blackburn, E Tseng, T Hon, TA Clark, MB Clark, ... Cell Systems 6 (2), 245-255. e5, 2018 | 139 | 2018 |
Spliced synthetic genes as internal controls in RNA sequencing experiments SA Hardwick, WY Chen, T Wong, IW Deveson, J Blackburn, SB Andersen, ... Nature methods 13 (9), 792-798, 2016 | 137 | 2016 |
Differential intron retention in Jumonji chromatin modifier genes is implicated in reptile temperature-dependent sex determination IW Deveson, CE Holleley, J Blackburn, JA Marshall Graves, JS Mattick, ... Science advances 3 (6), e1700731, 2017 | 122 | 2017 |
An update on the neurological short tandem repeat expansion disorders and the emergence of long-read sequencing diagnostics SR Chintalaphani, SS Pineda, IW Deveson, KR Kumar Acta Neuropathologica Communications 9 (1), 98, 2021 | 119 | 2021 |
Comprehensive genetic diagnosis of tandem repeat expansion disorders with programmable targeted nanopore sequencing I Stevanovski, SR Chintalaphani, H Gamaarachchi, JM Ferguson, ... Science advances 8 (9), eabm5386, 2022 | 113 | 2022 |
Synthetic microbe communities provide internal reference standards for metagenome sequencing and analysis SA Hardwick, WY Chen, T Wong, BS Kanakamedala, IW Deveson, ... Nature communications 9 (1), 3096, 2018 | 98 | 2018 |
Fast nanopore sequencing data analysis with SLOW5 H Gamaarachchi, H Samarakoon, SP Jenner, JM Ferguson, TG Amos, ... Nature biotechnology 40 (7), 1026-1029, 2022 | 79 | 2022 |
Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing KW Kim, IW Deveson, CNI Pang, M Yeang, Z Naing, T Adikari, ... Scientific reports 11 (1), 3934, 2021 | 72 | 2021 |
DNA methylation is required to maintain both DNA replication timing precision and 3D genome organization integrity Q Du, GC Smith, PL Luu, JM Ferguson, NJ Armstrong, CE Caldon, ... Cell Reports 36 (12), 2021 | 46 | 2021 |
No evidence of human genome integration of SARS-CoV-2 found by long-read DNA sequencing N Smits, J Rasmussen, GO Bodea, AA Amarilla, P Gerdes, ... Cell reports 36 (7), 2021 | 45 | 2021 |
Representing genetic variation with synthetic DNA standards IW Deveson, WY Chen, T Wong, SA Hardwick, SB Andersen, LK Nielsen, ... Nature methods 13 (9), 784-791, 2016 | 43 | 2016 |
Target RNA secondary structure is a major determinant of miR159 efficacy Z Zheng, M Reichel, I Deveson, G Wong, J Li, AA Millar Plant Physiology 174 (3), 1764-1778, 2017 | 42 | 2017 |
Two transcriptionally distinct pathways drive female development in a reptile with both genetic and temperature dependent sex determination SL Whiteley, CE Holleley, S Wagner, J Blackburn, IW Deveson, ... PLoS Genetics 17 (4), e1009465, 2021 | 33 | 2021 |
Normal and pathogenic variation of RFC1 repeat expansions: implications for clinical diagnosis N Dominik, S Magri, R Currò, E Abati, S Facchini, M Corbetta, ... Brain 146 (12), 5060-5069, 2023 | 32 | 2023 |