Robert Castelo
Robert Castelo
Associate Professor, Universitat Pompeu Fabra, COSTNET CA15109
Verified email at upf.edu - Homepage
Title
Cited by
Cited by
Year
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
ENCODE Project Consortium
nature 447 (7146), 799, 2007
52682007
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
LDW Hillier, W Miller, E Birney, W Warren, RC Hardison, CP Ponting, ...
Nature 432 (7018), 695-716, 2004
24262004
The ENCODE (ENCyclopedia of DNA elements) project
ENCODE Project Consortium
Science 306 (5696), 636-640, 2004
17762004
GSVA: gene set variation analysis for microarray and RNA-seq data
S Hänzelmann, R Castelo, J Guinney
BMC bioinformatics 14 (1), 1-15, 2013
17252013
Regulation of Fas alternative splicing by antagonistic effects of TIA-1 and PTB on exon definition
JM Izquierdo, N Majós, S Bonnal, C Martínez, R Castelo, R Guigó, ...
Molecular cell 19 (4), 475-484, 2005
3712005
EGASP: the human ENCODE genome annotation assessment project
R Guigó, P Flicek, JF Abril, A Reymond, J Lagarde, F Denoeud, ...
Genome biology 7 (1), 1-31, 2006
3092006
Tandem chimerism as a means to increase protein complexity in the human genome
G Parra, A Reymond, N Dabbouseh, ET Dermitzakis, R Castelo, ...
Genome research 16 (1), 37-44, 2006
2272006
Improving Markov chain Monte Carlo model search for data mining
P Giudici, R Castelo
Machine learning 50 (1), 127-158, 2003
2232003
Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions
F Denoeud, P Kapranov, C Ucla, A Frankish, R Castelo, J Drenkow, ...
Genome research 17 (6), 746-759, 2007
2062007
Origin of primate orphan genes: a comparative genomics approach
M Toll-Riera, N Bosch, N Bellora, R Castelo, L Armengol, X Estivill, ...
Molecular biology and evolution 26 (3), 603-612, 2009
1952009
A robust procedure for Gaussian graphical model search from microarray data with p larger than n.
R Castelo, A Roverato
Journal of Machine Learning Research 7 (12), 2006
1352006
On inclusion-driven learning of Bayesian networks
R Castelo, T Kocka
Journal of Machine Learning Research 4 (Sep), 527-574, 2003
116*2003
Reverse engineering molecular regulatory networks from microarray data with qp-graphs
R Castelo, A Roverato
Journal of Computational Biology 16 (2), 213-227, 2009
982009
Comparison of splice sites in mammals and chicken
JF Abril, R Castelo, R Guigó
Genome research 15 (1), 111-119, 2005
942005
Learning Bayesian network classifiers for credit scoring using Markov Chain Monte Carlo search
B Baesens, M Egmont-Petersen, R Castelo, J Vanthienen
Object recognition supported by user interaction for service robots 3, 49-52, 2002
682002
Splice site identification by idlBNs
R Castelo, R Guigó
Bioinformatics 20 (suppl_1), i69-i76, 2004
652004
Priors on network structures. Biasing the search for Bayesian networks
R Castelo, A Siebes
International Journal of Approximate Reasoning 24 (1), 39-57, 2000
632000
Improved learning of Bayesian networks
T Kocka, R Castelo
arXiv preprint arXiv:1301.2283, 2013
612013
A flexible count data model to fit the wide diversity of expression profiles arising from extensively replicated RNA-seq experiments
M Esnaola, P Puig, D Gonzalez, R Castelo, JR Gonzalez
BMC bioinformatics 14 (1), 1-22, 2013
552013
Public data and open source tools for multi-assay genomic investigation of disease
L Kannan, M Ramos, A Re, N El-Hachem, Z Safikhani, DMA Gendoo, ...
Briefings in bioinformatics 17 (4), 603-615, 2016
532016
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