Deren Eaton
Deren Eaton
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PyRAD: assembly of de novo RADseq loci for phylogenetic analyses
DAR Eaton
Bioinformatics 30 (13), 1844-1849, 2014
Inferring Phylogeny and Introgression using RADseq Data: An Example from Flowering Plants (Pedicularis: Orobanchaceae)
DAR Eaton, RH Ree
Systematic biology 62 (5), 689-706, 2013
ipyrad: Interactive assembly and analysis of RADseq datasets
DAR Eaton, I Overcast
Bioinformatics, 2020
A framework phylogeny of the American oak clade based on sequenced RAD data
AL Hipp, DAR Eaton, J Cavender-Bares, E Fitzek, R Nipper, PS Manos
PloS one 9 (4), e93975, 2014
Misconceptions on missing data in RAD-seq phylogenetics with a deep-scale example from flowering plants
DAR Eaton, EL Spriggs, B Park, MJ Donoghue
Systematic biology 66 (3), 399-412, 2017
Historical introgression among the American live oaks and the comparative nature of tests for introgression
DAR Eaton, AL Hipp, A González‐Rodríguez, J Cavender‐Bares
Evolution 69 (10), 2587-2601, 2015
Phylogeny and biogeography of the American live oaks (Quercus subsection Virentes): a genomic and population genetics approach
J Cavender‐Bares, A González‐Rodríguez, DAR Eaton, AAL Hipp, ...
Molecular ecology 24 (14), 3668-3687, 2015
Genotyping-by-sequencing as a tool to infer phylogeny and ancestral hybridization: a case study in Carex (Cyperaceae)
M Escudero, DAR Eaton, M Hahn, AL Hipp
Molecular Phylogenetics and Evolution 79, 359-367, 2014
Floral diversity and community structure in Pedicularis (Orobanchaceae)
DAR Eaton, CB Fenster, J Hereford, SQ Huang, RH Ree
Ecology 93 (sp8), S182-S194, 2012
Practical considerations for plant phylogenomics
MR McKain, MG Johnson, S Uribe‐Convers, D Eaton, Y Yang
Applications in plant sciences 6 (3), e1038, 2018
Paths to selection on life history loci in different natural environments across the native range of Arabidopsis thaliana
A Fournier‐Level, AM Wilczek, MD Cooper, JL Roe, J Anderson, D Eaton, ...
Molecular ecology 22 (13), 3552-3566, 2013
Identification of SNP markers for inferring phylogeny in temperate bamboos (P oaceae: B ambusoideae) using RAD sequencing
XQ Wang, L Zhao, DAR Eaton, DZ Li, ZH Guo
Molecular Ecology Resources 13 (5), 938-945, 2013
Coral hybridization or phenotypic variation? Genomic data reveal gene flow between Porites lobata and P. compressa
ZH Forsman, ISS Knapp, K Tisthammer, DAR Eaton, M Belcaid, ...
Molecular Phylogenetics and Evolution 111, 132-148, 2017
Restriction-Site-Associated DNA Sequencing Reveals a Cryptic Viburnum Species on the North American Coastal Plain
EL Spriggs, DAR Eaton, PW Sweeney, C Schlutius, EJ Edwards, ...
Systematic Biology 68 (2), 187-203, 2019
Joint Phylogenetic Estimation of Geographic Movements and Biome Shifts during the Global Diversification of Viburnum
MJ Landis, DAR Eaton, WL Clement, B Park, EL Spriggs, PW Sweeney, ...
Systematic Biology 70 (1), 67-85, 2021
Phylogeny of Hawaiian Melicope (Rutaceae): RAD-seq resolves species relationships and reveals ancient introgression
C Paetzold, KR Wood, DAR Eaton, WL Wagner, MS Appelhans
Frontiers in Plant Science, 1074, 2019
Inferring processes of coevolutionary diversification in a community of Panamanian strangler figs and associated pollinating wasps
JD Satler, EA Herre, KC Jandér, DAR Eaton, CA Machado, TA Heath, ...
Evolution 73 (11), 2295-2311, 2019
Toytree: A minimalist tree visualization and manipulation library for Python
DAR Eaton
Methods in Ecology and Evolution 11 (1), 187-191, 2020
Differences in flowering time maintain species boundaries in a continental radiation of Viburnum
EL Spriggs, C Schlutius, DA Eaton, B Park, PW Sweeney, EJ Edwards, ...
American Journal of Botany 106 (6), 833-849, 2019
Using phylogenomics to infer the evolutionary history of oaks
AL Hipp, DAR Eaton, J Cavender-Bares, R Nipper, PS Manos
Int Oak J 24, 61-71, 2013
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