Local states of chromatin compaction at transcription start sites control transcription levels S Ishihara, Y Sasagawa, T Kameda, H Yamashita, M Umeda, N Kotomura, ... Nucleic acids research 49 (14), 8007-8023, 2021 | 21 | 2021 |
Histone Tail Dynamics in Partially Disassembled Nucleosomes During Chromatin Remodeling T Kameda, A Awazu, Y Togashi Frontiers in molecular biosciences 6, 133, 2019 | 13 | 2019 |
Free Energy Landscape of RNA Binding Dynamics in Start Codon Recognition by Eukaryotic Ribosomal Pre-Initiation Complex T Kameda, K Asano, Y Togashi PLOS Computational Biology 17 (6), e1009068, 2021 | 5 | 2021 |
Structural Dynamics of DNA Depending on Methylation Pattern T Kameda, MM Suzuki, A Awazu, Y Togashi Physical Review E 103 (1), 012404, 2021 | 5 | 2021 |
Translational recoding by chemical modification of non-AUG start codon ribonucleotide bases Y Fujita, T Kameda, CR Singh, W Pepper, A Cecil, M Hilgers, M Thornton, ... Science Advances 8 (14), eabm8501, 2022 | 3 | 2022 |
The 1-Particle-per-k-Nucleotides (1PkN) Elastic Network Model of DNA Dynamics with Sequence-Dependent Geometry T Kameda, S Isami, Y Togashi, H Nishimori, N Sakamoto, A Awazu Frontiers in physiology 8, 103, 2017 | 3 | 2017 |
Molecular dynamics analysis of biomolecular systems including nucleic acids T Kameda, A Awazu, Y Togashi Biophysics and Physicobiology 19, e190027, 2022 | 2 | 2022 |
Computational Analysis of Molecular Dynamics in Biomolecular Systems Including Nucleic Acids T Kameda 広島大学 (Hiroshima University), 2021 | | 2021 |
Molecular Dynamics Analysis of Partially Disassembled Nucleosomes T Kameda, A Awazu, Y Togashi Biophysics (Japan) 60 (5), 288-290, 2020 | | 2020 |
The 9th Taiwan-Japan Joint Workshop for Young Scholars in Applied Mathematics 國立成功大學成功校區, 理化大樓, 格致廳小講堂 | | 2018 |
分子動力学法を用いたヒストンの部分的欠失依存的な一分子ヌクレオソーム動態の解析 亀田健, 冨樫祐一, 粟津暁紀 日本物理学会講演概要集 73.1, 3008-3008, 2018 | | 2018 |
ヒストンの部分的欠失に依存した単一ヌクレオソーム構造の不安定性解析 亀田健, 冨樫祐一, 粟津暁紀 日本物理学会講演概要集 72.2, 2851-2851, 2017 | | 2017 |
リピート配列依存的な局所クロマチン構造の解析 亀田健, 池谷淳, 坂本尚昭, 粟津暁紀 日本物理学会講演概要集 72.1, 3235-3235, 2017 | | 2017 |
19pBW-7 弾性ネットワークモデルを用いたゲノムの動態と機能の解析 亀田健, 勇修平, 西森拓, 坂本尚昭, 粟津暁紀 日本物理学会講演概要集 71.1, 3177, 2016 | | 2016 |
粗視化モデルを用いた DNA の配列依存的な力学的特性の解析 亀田健, 冨樫祐一, 西森拓, 坂本尚昭, 粟津暁紀 日本物理学会講演概要集 71.2, 3053-3053, 2016 | | 2016 |
Cytochemical studies of histones in basal cell nuclei of the epidermis. I. Relationship between epidermal thickness and histone basicity of basal cell nuclei (author's transl) T Kameda Nihon Hifuka Gakkai zasshi. The Japanese journal of dermatology 88 (4), 263-268, 1978 | | 1978 |
Supplementary Text S1: Overview of Molecular Simulation T Kameda, A Awazu, Y Togashi | | |