Nick Goldman
Title
Cited by
Cited by
Year
Initial sequencing and comparative analysis of the mouse genome
AT Chinwalla, LL Cook, KD Delehaunty, GA Fewell, LA Fulton, RS Fulton, ...
Nature 420 (6915), 520-562, 2002
6975*2002
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
E Birney, JA Stamatoyannopoulos, A Dutta, R Guigˇ, TR Gingeras, ...
Nature 447 (7146), 799-816, 2007
50082007
Codon-substitution models for heterogeneous selection pressure at amino acid sites
Z Yang, R Nielsen, N Goldman, AMK Pedersen
Genetics 155 (1), 431-449, 2000
22982000
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
S Whelan, N Goldman
Molecular Biology and Evolution 18 (5), 691-699, 2001
22972001
A codon-based model of nucleotide substitution for protein-coding DNA sequences.
N Goldman, Z Yang
Molecular Biology and Evolution 11 (5), 725-736, 1994
20331994
Likelihood-based tests of topologies in phylogenetics
N Goldman, JP Anderson, AG Rodrigo
Systematic Biology 49 (4), 652-670, 2000
11322000
A high-resolution map of human evolutionary constraint using 29 mammals
K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ...
Nature 478 (7370), 476-482, 2011
9152011
An algorithm for progressive multiple alignment of sequences with insertions
A L÷ytynoja, N Goldman
Proceedings of the National Academy of Sciences of the United States ofá…, 2005
8252005
Statistical tests of models of DNA substitution
N Goldman
Journal of Molecular Evolution 36 (2), 182-198, 1993
7831993
Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis
A L÷ytynoja, N Goldman
Science 320 (5883), 1632-1635, 2008
6922008
Insights into hominid evolution from the gorilla genome sequence
A Scally, JY Dutheil, LDW Hillier, GE Jordan, I Goodhead, J Herrero, ...
Nature 483 (7388), 169-175, 2012
6202012
Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites
WSW Wong, Z Yang, N Goldman, R Nielsen
Genetics 168 (2), 1041-1051, 2004
5792004
Towards practical, high-capacity, low-maintenance information storage in synthesized DNA
N Goldman, P Bertone, S Chen, C Dessimoz, EM LeProust, B Sipos, ...
Nature 494 (7435), 77-80, 2013
5552013
Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation.
Z Yang, N Goldman, A Friday
Molecular biology and evolution 11 (2), 316-324, 1994
4791994
Molecular phylogenetics: state-of-the-art methods for looking into the past
S Whelan, P Lio, N Goldman
TRENDS in Genetics 17 (5), 262-272, 2001
4652001
Systematic evaluation of spliced alignment programs for RNA-seq data
PG Engstrom, T Steijger, B Sipos, GR Grant, A Kahles, G Raetsch, ...
NATURE METHODS 10 (12), 1185-+, 2013
4212013
Models of molecular evolution and phylogeny
P Li˛, N Goldman
Genome research 8 (12), 1233-1244, 1998
3681998
Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution
RC Hardison, KM Roskin, S Yang, M Diekhans, WJ Kent, R Weber, ...
Genome research 13 (1), 13-26, 2003
3242003
webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser
A L÷ytynoja, N Goldman
BMC bioinformatics 11 (1), 579, 2010
2852010
Maximum likelihood trees from DNA sequences: a peculiar statistical estimation problem
Z Yang, N Goldman, A Friday
Systematic Biology 44 (3), 384-399, 1995
2731995
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Articles 1–20