| CWL-Airflow: a lightweight pipeline manager supporting Common Workflow Language M Kotliar, AV Kartashov, A Barski Gigascience 8 (7), giz084, 2019 | 59 | 2019 |
| Microbiota-sensitive epigenetic signature predicts inflammation in Crohn’s disease D Kelly, M Kotliar, V Woo, S Jagannathan, J Whitt, J Moncivaiz, ... JCI insight 3 (18), 2018 | 57 | 2018 |
| Single-cell RNA-Seq of human esophageal epithelium in homeostasis and allergic inflammation M Rochman, T Wen, M Kotliar, PJ Dexheimer, NBB Morgenstern, ... JCI insight 7 (11), 2022 | 30 | 2022 |
| Vitamin D receptor and STAT6 interactome governs oesophageal epithelial barrier responses to IL-13 signalling M Brusilovsky, M Rochman, T Shoda, M Kotliar, JM Caldwell, LE Mack, ... Gut 72 (5), 834-845, 2023 | 12 | 2023 |
| maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks TA Cazares, FW Rizvi, B Iyer, X Chen, M Kotliar, AT Bejjani, JA Wayman, ... PLOS Computational Biology 19 (1), e1010863, 2023 | 11 | 2023 |
| Epigenetic analysis of the chromatin landscape identifies a repertoire of murine eosinophil-specific PU. 1-bound enhancers JM Felton, S Vallabh, S Parameswaran, LE Edsall, K Ernst, B Wronowski, ... The Journal of Immunology 207 (4), 1044-1054, 2021 | 5 | 2021 |
| Nuclear Vav3 is required for polycomb repression complex-1 activity in B-cell lymphoblastic leukemogenesis RC Nayak, KH Chang, AK Singh, M Kotliar, M Desai, AM Wellendorf, ... Nature communications 13 (1), 3056, 2022 | 4 | 2022 |
| TSLP shapes the pathogenic responses of memory CD4+ T cells in eosinophilic esophagitis Y Rochman, M Kotliar, N Ben-Baruch Morgenstern, A Barski, T Wen, ... Science Signaling 16 (802), eadg6360, 2023 | 3 | 2023 |
| Preparation of mouse pancreatic tumor for single-cell RNA sequencing and analysis of the data A Surumbayeva, M Kotliar, L Gabitova-Cornell, A Kartashov, S Peri, ... STAR protocols 2 (4), 100989, 2021 | 2 | 2021 |
| Crosstalk between Aryl Hydrocarbon Receptor (AHR) Pathway and IL-13 Signaling in Human Keratinocytes and Implications for Atopic Dermatitis S Proper, A Appiagyei, A Dwyer, J Felton, NBB Morgenste, J Marlman, ... Journal of Allergy and Clinical Immunology 151 (2), AB192, 2023 | 1 | 2023 |
| KMT2D Regulates thymic Egress by Modulating Maturation and integrin Expression SJ Potter, L Zhang, M Kotliar, Y Wu, C Schafer, K Stefan, L Boukas, ... bioRxiv, 2022.10. 04.510662, 2022 | 1 | 2022 |
| Cholesterol auxotrophy promotes the expansion of centroacinar cells giving rise to the basal subtype of pancreatic adenocarcinoma. M Kotliar, A Surumbayeva, L Gabitova, S Peri, D Restifo, KQ Cai, A Barski, ... CANCER RESEARCH 81 (22), 48-49, 2021 | 1 | 2021 |
| KMT2D Haploinsufficiency in Kabuki Syndrome Impairs Differentiation of Neural Crest Cells WJ Lavery, M Kotliar, CF Chang, SA Brugmann, A Barski, AW Lindsley The FASEB Journal 34 (S1), 1-1, 2020 | 1 | 2020 |
| Aryl hydrocarbon receptor and IL-13 signaling crosstalk in human keratinocytes and atopic dermatitis SP Proper, AT Dwyer, A Appiagyei, JM Felton, ... Frontiers in Allergy 5, 1323405, 2024 | | 2024 |
| Accelerating Single-Cell Sequencing Data Analysis with SciDAP: A User-Friendly Approach M Kotliar, A Kartashov, A Barski bioRxiv, 2024.02. 28.582604, 2024 | | 2024 |
| Caspase 8 protects pancreatic neoplasia from KRAS-driven necroptotic priming S Tishina, A Dahlhaus, A Androulidaki, M Kotliar, L Mulalic, ... | | 2023 |
| KMT2D regulates activation, localization, and integrin expression by T cells SJ Potter, L Zhang, M Kotliar, Y Wu, C Schafer, K Stefan, L Boukas, ... Frontiers in Immunology 15, 1341745, 2023 | | 2023 |
| Inflammatory response to dietary carbohydrates contributes to the formation of hepatic metastatic niche. A Surumbayeva, R Williams, M Kotliar, M Taylor, DBV Costa, C Ogier, ... CANCER RESEARCH 82 (22), 69-69, 2022 | | 2022 |
| Abstract B019: Inflammatory response to dietary carbohydrates contributes to the formation of hepatic metastatic niche A Surumbayeva, R Williams, M Kotliar, M Taylor, DBV Costa, C Ogier, ... Cancer Research 82 (22_Supplement), B019-B019, 2022 | | 2022 |
| Role of transcription factor RUNX1 in the maintenance of T helper cell epigenome and rapid recall response S Korinfskaya, M Kotliar, A Katko, D Hildeman, ER Miraldi, A Barski The Journal of Immunology 208 (1_Supplement), 56.13-56.13, 2022 | | 2022 |
Andrey KartashovCo-Founder, Datirium LLCVerified email at datirium.com
